⚠

NOTICE! This is a static HTML version of a legacy Fiji BugZilla bug.

The Fiji project now uses GitHub Issues for issue tracking.

Please file all new issues there.

Bug 127 - Track EM
Track EM
Status: RESOLVED FIXED
Product: Fiji
Classification: Unclassified
Component: TrakEM2
unspecified
PC Linux
: P2 normal
Assigned To: Albert Cardona
Depends on:
Blocks:
 
Reported: 2010-01-06 10:41 CST by Jean-Marc Verbavatz
Modified: 2010-01-07 11:31 CST
0 users

See Also:
Description Jean-Marc Verbavatz 2010-01-06 10:41:07 CST 
Trying to create a new (blank) project in TRackEM2, one window opens (I don´t know how many should open though) with tabs and icons and a black square, but I can use the right button menu and I get the  Log below.
Using Linux Mandriva 2010, and java sun-1.6.0.16.

==================
ERROR:
java.lang.reflect.InvocationTargetException
	at java.awt.EventQueue.invokeAndWait(EventQueue.java:997)
	at javax.swing.SwingUtilities.invokeAndWait(SwingUtilities.java:1323)
	at ini.trakem2.ControlWindow$3.run(ControlWindow.java:317)
Caused by: java.lang.NoClassDefFoundError: javax/media/j3d/Shape3D
	at java.lang.ClassLoader.defineClass1(Native Method)
	at java.lang.ClassLoader.defineClass(ClassLoader.java:621)
	at java.lang.ClassLoader.defineClass(ClassLoader.java:466)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:162)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:140)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:135)
	at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320)
	at ini.trakem2.ControlWindow.<init>(ControlWindow.java:78)
	at ini.trakem2.ControlWindow.<init>(ControlWindow.java:60)
	at ini.trakem2.ControlWindow$2.run(ControlWindow.java:185)
	at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:199)
	at java.awt.EventQueue.dispatchEvent(EventQueue.java:597)
	at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
	at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
	at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
	at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
Caused by: java.lang.ClassNotFoundException: javax.media.j3d.Shape3D
	at java.lang.ClassLoader.findClass(ClassLoader.java:359)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:173)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:140)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:135)
	at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320)
	... 18 more
==> Caused by:
java.lang.NoClassDefFoundError: javax/media/j3d/Shape3D
	at java.lang.ClassLoader.defineClass1(Native Method)
	at java.lang.ClassLoader.defineClass(ClassLoader.java:621)
	at java.lang.ClassLoader.defineClass(ClassLoader.java:466)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:162)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:140)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:135)
	at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320)
	at ini.trakem2.ControlWindow.<init>(ControlWindow.java:78)
	at ini.trakem2.ControlWindow.<init>(ControlWindow.java:60)
	at ini.trakem2.ControlWindow$2.run(ControlWindow.java:185)
	at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:199)
	at java.awt.EventQueue.dispatchEvent(EventQueue.java:597)
	at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
	at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
	at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
	at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
Caused by: java.lang.ClassNotFoundException: javax.media.j3d.Shape3D
	at java.lang.ClassLoader.findClass(ClassLoader.java:359)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:173)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:140)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:135)
	at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320)
	... 18 more
==> Caused by:
java.lang.ClassNotFoundException: javax.media.j3d.Shape3D
	at java.lang.ClassLoader.findClass(ClassLoader.java:359)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:173)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:140)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:135)
	at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320)
	at java.lang.ClassLoader.defineClass1(Native Method)
	at java.lang.ClassLoader.defineClass(ClassLoader.java:621)
	at java.lang.ClassLoader.defineClass(ClassLoader.java:466)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:162)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:140)
	at fiji.FijiClassLoader.loadClass(FijiClassLoader.java:135)
	at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320)
	at ini.trakem2.ControlWindow.<init>(ControlWindow.java:78)
	at ini.trakem2.ControlWindow.<init>(ControlWindow.java:60)
	at ini.trakem2.ControlWindow$2.run(ControlWindow.java:185)
	at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:199)
	at java.awt.EventQueue.dispatchEvent(EventQueue.java:597)
	at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
	at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
	at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
	at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
==================
Comment 1 Jean-Marc Verbavatz 2010-01-07 11:31:34 CST 
Bug fixed: there were conflicting Java installs on the system.