1. Open the Fiji Updater
2. Push "advanced mode" button
3. Choose view locally modified plugins only
4. Click on the TrakEM2_.jar row and select "upload it" in the pulldown
5. Push "Upload to server": the following exception is thrown (see below),
and the dialogs for resolving dependencies and entering the password don't show.
6. Select some other row.
7. Select again the TrakEM2_.jar row, set the pulldown to something else, then
again to "upload it", then push "Upload to server": all works as expected.

There were many instances of the first exception. When finally selecting
some other row, then the second Exception was shown (I don't know exactly when).


Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException
        at javax.swing.text.CompositeView.replace(CompositeView.java:170)
        at javax.swing.text.BoxView.replace(BoxView.java:164)
        at javax.swing.text.FlowView$FlowStrategy.layoutRow(FlowView.java:553)
        at javax.swing.text.FlowView$FlowStrategy.layout(FlowView.java:460)
        at javax.swing.text.FlowView.layout(FlowView.java:184)
        at javax.swing.text.BoxView.setSize(BoxView.java:380)
        at javax.swing.text.BoxView.updateChildSizes(BoxView.java:349)
        at javax.swing.text.BoxView.setSpanOnAxis(BoxView.java:331)
        at javax.swing.text.BoxView.layout(BoxView.java:691)
        at javax.swing.text.BoxView.setSize(BoxView.java:380)
        at javax.swing.plaf.basic.BasicTextUI$RootView.setSize(BasicTextUI.java:1702)
        at javax.swing.plaf.basic.BasicTextUI.modelToView(BasicTextUI.java:1034)
        at javax.swing.text.DefaultCaret.repaintNewCaret(DefaultCaret.java:1291)
        at javax.swing.text.DefaultCaret$1.run(DefaultCaret.java:1270)
        at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
        at java.awt.EventQueue.dispatchEvent(EventQueue.java:597)
        at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
        at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
        at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
        at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
        at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
        at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
Exception in thread "Thread-4" java.lang.NullPointerException
        at javax.swing.text.FlowView$FlowStrategy.layoutRow(FlowView.java:546)
        at javax.swing.text.FlowView$FlowStrategy.layout(FlowView.java:460)
        at javax.swing.text.FlowView.layout(FlowView.java:184)
        at javax.swing.text.BoxView.setSize(BoxView.java:380)
        at javax.swing.text.BoxView.updateChildSizes(BoxView.java:349)
        at javax.swing.text.BoxView.setSpanOnAxis(BoxView.java:331)
        at javax.swing.text.BoxView.layout(BoxView.java:691)
        at javax.swing.text.BoxView.setSize(BoxView.java:380)
        at javax.swing.plaf.basic.BasicTextUI$RootView.setSize(BasicTextUI.java:1702)
        at javax.swing.plaf.basic.BasicTextUI.getPreferredSize(BasicTextUI.java:900)
        at javax.swing.JComponent.getPreferredSize(JComponent.java:1634)
        at javax.swing.JEditorPane.getPreferredSize(JEditorPane.java:1412)
        at javax.swing.ScrollPaneLayout.layoutContainer(ScrollPaneLayout.java:769)
        at java.awt.Container.layout(Container.java:1421)
        at java.awt.Container.doLayout(Container.java:1410)
        at java.awt.Container.validateTree(Container.java:1507)
        at java.awt.Container.validateTree(Container.java:1513)
        at java.awt.Container.validateTree(Container.java:1513)
        at java.awt.Container.validateTree(Container.java:1513)
        at java.awt.Container.validateTree(Container.java:1513)
        at java.awt.Container.validate(Container.java:1480)
        at java.awt.Dialog.conditionalShow(Dialog.java:889)
        at java.awt.Dialog.show(Dialog.java:1035)
        at fiji.updater.ui.ResolveDependencies.resolve(ResolveDependencies.java:122)
        at fiji.updater.ui.UpdaterFrame.upload(UpdaterFrame.java:630)
        at fiji.updater.ui.UpdaterFrame$5$1.run(UpdaterFrame.java:249)



[Enter details of the problem or bug and how to reproduce it here.]

Information about your version of Java - this information is useful for the Fiji developers:

  os.arch => amd64
  os.name => Linux
  os.version => 2.6.32-24-generic
  java.version => 1.6.0_20
  java.vendor => Sun Microsystems Inc.
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.6.0_20-b02
  java.vm.name => Java HotSpot(TM) 64-Bit Server VM
  java.vm.version => 16.3-b01
  java.vm.vendor => Sun Microsystems Inc.
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.X11GraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.6
  sun.cpu.endian => little
  sun.desktop => gnome
  file.separator => /

The up-to-date check says: You wanted never to be reminded.

Information about the version of each plugin:

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