NOTICE! This is a static HTML version of a legacy Fiji BugZilla bug.

The Fiji project now uses GitHub Issues for issue tracking.

Please file all new issues there.

Bug 360 - Extra text in default filename field
Extra text in default filename field
Status: RESOLVED WONTFIX
Product: Fiji
Classification: Unclassified
Component: Plugins
unspecified
Macintosh Mac OS
: P4 normal
Assigned To: ImageJ Bugs Mailing List
: 365
Depends on:
Blocks:
 
Reported: 2011-09-01 23:29 CDT by Matt Wyczalkowski
Modified: 2011-09-20 19:43 CDT
3 users (show)

See Also:

Description Matt Wyczalkowski 2011-09-01 23:29:31 CDT
When saving image and/or results, the text "stripThis" is added at the end of the default filename, e.g. "results.txt.stripThis"



Information about your version of Java - this information is useful for the Fiji developers:

  os.arch => x86_64
  os.name => Mac OS X
  os.version => 10.6.8
  java.version => 1.6.0_26
  java.vendor => Apple Inc.
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.6.0_26-b03-384-10M3425
  java.vm.name => Java HotSpot(TM) 64-Bit Server VM
  java.vm.version => 20.1-b02-384
  java.vm.vendor => Apple Inc.
  java.vm.info => mixed mode
  java.awt.graphicsenv => apple.awt.CGraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.6
  sun.cpu.endian => little
  sun.desktop => null
  file.separator => /

The up-to-date check says: Up-to-date

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to: null
  fiji.dir => /Applications/Fiji.app

Information about the version of each plugin:

  1d9392f13fb50b97b6da7a5b91e7d72292f3af7c 20110901155117 fiji-macosx
  7daaae54cd0263e35de4354a0f6ef0316c9a21b2 20110901155120 fiji-tiger
  1faaeed6d4934d8a46c051d1bfda65fc5c75e20e 20110726172458 images/icon-flat.png
  a02d5340c301b7c681bea6bec2bfa822bf05ccf8 20100613190307 images/icon.png
  18f2225de840c1e5a184385d59e5efd2499798aa 20110901155235 jars/Fiji.jar
  31fc72943db1de218eb827e7ea3becc16d76d851 20100613190205 jars/Jama-1.0.2.jar
  d24e6b20cc278d509b8b16628c8ea1e646013b26 20110627134343 jars/VIB-lib.jar
  bd57338068f48b9ce4c5275544633ba172b0902a 20110223151013 jars/VectorString.jar
  68a9e41d2a7cec1ffedd5e38f4c064927b43b3c7 20110315163759 jars/ant-junit.jar
  4199e18036ba2020bdcbc733f603564f41cf9009 20100609192422 jars/ant-launcher.jar
  92b2335d3a97549b633dbcc3c41381a90f2b924b 20100609192422 jars/ant-nodeps.jar
  b1492f77c5c13e4f9dc05fe0ba9f95d6ec826660 20100609192422 jars/ant.jar
  5bab776822719667a604b8fb2eafc679161aeb0f 20100613190239 jars/autocomplete.jar
  dbab80ab5e11fb33328c7da88a849d0a19793ff5 20100613190239 jars/batik.jar
  d21bc3c19ebc5b3924caff5f859e6c50071590c9 20100609192422 jars/bsh-2.0b4.jar
  efd0b4a7eaf55c0716fde3243ac45cb49fdd2606 20100609192422 jars/clibwrapper_jiio.jar
  818133e9568608a06584336a3f5bb5af7b339b00 20110411134736 jars/clojure.jar
  d760adf70f63d2f07fe00dc5f36b9bc32f11fc97 20110209165227 jars/commons-math.jar
  368901ce572a723c0ae0e68f0563b2712a69fd5d 20100609192422 jars/edu_mines_jtk.jar
  58ae0e5aef6e1050ec0eb713202ff63fd08eae09 20110726172453 jars/fake.jar
  e0e3dd4e9c7055009a998a4eeeb80430ca4f1064 20110901155147 jars/fiji-lib.jar
  c06d6da175e7977eb53e38b00ddfcd10c3a4d20f 20110627134313 jars/fiji-scripting.jar
  4392da8d78645d71760cad8d893ceb870705c3b6 20110901155230 jars/ij.jar
  04530e150af0702f6f963104facda5eaa6e866ae 20110209165205 jars/imagescience.jar
  780fae4087869e6c485796fd6df1e399e64fc44e 20110209165232 jars/imageware.jar
  85af6645584bd2339848a2a9c95db234ba0a68ea 20110209165230 jars/imglib-algorithms.jar
  74c636f9f5f1eab9bea14d5bebefd01f1ad787d6 20110627134345 jars/imglib-ij.jar
  6e975ef98eec855b1d2baaa57f6f91992939f6de 20110627134345 jars/imglib-io.jar
  4053be284a4fd91bfddc9e512ddc6366b2dc6f11 20110209165231 jars/imglib-scripting.jar
  daefbf7cae0bd397f4985ae56b40f92c008bda42 20110411134740 jars/imglib.jar
  9768d24a942a92c6981c719b3157429569806384 20110810141452 jars/itextpdf-5.1.1.jar
  1d98f5251cb21553b4907228cd281e6b84d3a216 20100613190239 jars/jacl.jar
  253316728c4012a86fae361e7b7fcb0fab0f5c38 20100609192423 jars/jai_codec.jar
  2a328b6b63ebec85d369427875739304dc1cf2cb 20100609192423 jars/jai_core.jar
  80b8e588bbdba61cf76f1f7b218a0387a6691ab3 20110315163747 jars/javac.jar
  5000664ee8b54ad75a72da627ab7665ca422f10b 20100609192423 jars/jcommon-1.0.12.jar
  166036abb16a0b57c7f7c0a0e0e610ef72b48746 20100613190257 jars/jep.jar
  ca45b966d92e07a3bcea6be98cbab05ea0d4e1ba 20110209165226 jars/jfreechart-1.0.13.jar
  925d65018db8d43d79f3e1236c0178805f68c488 20110209165230 jars/jna.jar
  63e9057128a2096b3787c4c784a5b6dab862264d 20100609192423 jars/jpedalSTD.jar
  b904075730a195dff53e602e836e6ced7b438257 20110209165208 jars/jruby.jar
  108412260f226609c8161f6e831119f47e6d9380 20100609192423 jars/js.jar
  8ac2d354cd5af826d9982c5b8fd9b32fc108d0bd 20110517141218 jars/jsch-0.1.44.jar
  8e9a4bd810c0d4c6cc42df2e974373c24f3b4372 20100613190219 jars/junit-4.5.jar
  d6edc3bbc639248e808f4cc0e372cfa249320016 20110209165222 jars/jython.jar
  a21f73a79260a9098df7eabf10982ab9ff2d9efe 20100609192423 jars/jzlib-1.0.7.jar
  ae776ee76c169400650847991e70e528bc7c6037 20110726172457 jars/mij.jar
  034272ff89f783b3185a020f47ebffbda8cf9c64 20110808123819 jars/mpicbg.jar
  e008825954f9c01c5e3b3fa0004caa7535a45423 20100613190219 jars/pal-optimization.jar
  5cc5e4e537c2c5824beadcb03b7a1d6805e3a42f 20100609192423 jars/postgresql-8.2-506.jdbc3.jar
  b1bdf4b6b3e47ac5edb3d9ec8273401f6e8f64a3 20110223151012 jars/rsyntaxtextarea.jar
  7d5ba6c535ddd4557ca46698f08262348eeb072c 20110209165232 jars/wavelets.jar
  5dad0d14403c14be8273bf53efcfc3d75c07f361 20110209165234 jars/weave_jy2java.jar
  62509dafa2ad38e0e3c34c538f6d3da1e25971ce 20100613190240 jars/weka.jar
  c432f64b204f9657354de2010b24535670e3073b 20100609192423 luts/16_colors.lut
  89419f9999bc7d1dc09ad1a66e04e819396fe09f 20100609192423 luts/5_ramps.lut
  dc3a1bdd2b34edec84c29affaded489d0a22601d 20100609192423 luts/6_shades.lut
  0b3bbb6cf86adcb697c53c0277a12140966375dc 20100609192423 luts/Cyan Hot.lut
  655b55e6322c870632e5ff3156f002c0f5b893fe 20100609192423 luts/Green Fire Blue.lut
  2918f6d391ee38a4491163c30b4e75256a6633e7 20100609192423 luts/HiLo.lut
  a3312d3ff046120cccf5adcd400c512f78d18f93 20100609192423 luts/ICA.lut
  db5bf8a4e880d787d88f3273caf3db7ae6a5974f 20100609192423 luts/ICA2.lut
  9f7dd167f698970549ec20aa7d26b221ae7928f8 20100609192423 luts/ICA3.lut
  697dd3a4daf4abcd05cc4a79af3bcb3364fd0bb0 20100609192423 luts/Magenta Hot.lut
  524604de124b812940b02541a63516c84621237b 20100609192423 luts/Orange Hot.lut
  9c9a56c239e5d9c3262ace5124fff406cb3b831d 20100609192423 luts/Rainbow RGB.lut
  4e686ec669057c7de78497720bf52ebe00c3f8da 20100609192423 luts/Red Hot.lut
  2fdb7c96583f42348cd5cc789fba38dd6e349c89 20100609192423 luts/Thermal.lut
  321574916ccee56861ca6d581f6915cff5fe80e1 20100609192423 luts/Yellow Hot.lut
  a4cec22b96c306321ba4c7b3ff30df9fa7919616 20100609192423 luts/blue_orange_icb.lut
  c9e396a3f83ee8cebf1ed28d3e2d53296cc908e7 20100609192423 luts/brgbcmyw.lut
  60f85e63ba9a31fbb769ab32c75c22883df22883 20100609192423 luts/cool.lut
  ba88e5f3db79551a10b7bed5c2517b33cea57dda 20100609192423 luts/edges.lut
  0a4dce83c72986c06356ecbab98747c30c9366ad 20100609192423 luts/gem.lut
  c616e76585643c232c743e16358d68e4dfe24620 20100609192423 luts/glasbey.lut
  1f99f07ea5760dd8c044639b02da116112a2b985 20100609192423 luts/phase.lut
  52a3c3995ef92bc35eb4e691848af5351be589e4 20100609192428 luts/physics.lut
  49f5e48a355fe0646cd99bf7b371afb7c603def8 20100609192423 luts/royal.lut
  898954dd1342741de1cd48e7c581b6ec0f0cbff2 20100609192423 luts/sepia.lut
  ebd4ed6b0fd5375bd4d143134da5692253d4d44a 20100609192423 luts/smart.lut
  36e7ca9e01240243fb69ea5da21655608d6b5ef8 20100609192423 luts/thal.lut
  940b38f9db4fbe78ccd66222a08b28d1ae98ba04 20100609192423 luts/thallium.lut
  172436819bfde39bcf02fc8b41735f0c20db2ad1 20100609192423 luts/unionjack.lut
  a97e1da9c67b6764787b27473bbdb4a21d68292b 20100609192423 macros/listManagement.txt
  1785bbbf1033afe28da411beb5c2efea6bab1186 20110315163758 macros/toolsets/Clear Custom Tools.txt
  54200f47f8a6d5a131a7d9d65d7fcb75d53f97ae 20100609192423 macros/toolsets/Drawing Tools.txt
  9bd39ac4d51a3fa9ed4c85b78fac065b2aa6b201 20110726172457 macros/toolsets/Lookup Tables.txt
  f7efa1b3ca937510748f52b79ce283c1342d2012 20110223150916 misc/headless.jar
  8dee3846e4ca1a0ad4169cf5e4859bcf52b878af 20110428144855 plugins/3D_Blob_Segmentation.jar
  fa47c405e684e4a9fa699507c2f9605c17d6fc02 20100613190254 plugins/3D_Objects_Counter.jar
  a7d517d98a5457af916919de4c81b28e7af57d79 20110815115122 plugins/3D_Viewer.jar
  68175df528f66e558b40d41867aa3539f55518bd 20100613190258 plugins/Algorithm_Launcher.jar
  9dad1252e01edbdb82fca2547d3ab0d38a9e0642 20110413232716 plugins/Alpha_Channel.class
  9274f3373b27930ae5e6f3d1f88674f64110e970 20100609192423 plugins/Analyze/Dynamic_ROI_Profiler.clj
  7acae667f3873c3f47eb0fbf1d6b5f0718a5a1f9 20100609192423 plugins/Analyze/Measure_RGB.txt
  bd9db67ed673a3d7815dbe16ed2f2676581d6c6c 20110428144827 plugins/AnalyzeSkeleton_.jar
  57e92445bb3feda9d1ffe6e6d4a682b70d2d0ed9 20100613190244 plugins/Analyze_Reader_Writer.jar
  abe815e897d0bf5e97a29cec0b6af47df8a5ec35 20110627134345 plugins/Anisotropic_Diffusion_2D.jar
  54cd4a1066d31573ce3181c08565f8ede58ec3a5 20110517141207 plugins/Arrow_.jar
  6ad769a23d862c28b680d036bad02fd3c3a43799 20110428144827 plugins/Auto_Threshold.jar
  51468378eaec5b38e9afa03b73739c0dffbf523b 20110901155121 plugins/BeanShell_Interpreter.jar
  3651a154d58f245e4e920ac60de1dcb88cefe592 20110627134313 plugins/Bug_Submitter.jar
  e43ae2651743ca70a12b898b8bd7e084e2288943 20110209165208 plugins/CLI_.jar
  919ab06bdcbf59c28aeca3f340f7cd8285e29780 20110315163800 plugins/CPU_Meter.jar
  d888370a9a41fe87d542665027edc84eff31637e 20100613190254 plugins/Calculator_Plus.jar
  24b3de8e1cad2cbeb06d861c10784f1775dcfad1 20110411134737 plugins/Clojure_Interpreter.jar
  7f2329fef0567c2f838aefbec7cfb382ce0691f7 20110810141440 plugins/Colocalisation_Analysis.jar
  f2f8c5c376c80df66cc1ccbcbf12babd366eda85 20100613190244 plugins/Color_Histogram.jar
  1cee26bc818eb02dafe9ad08dd437b10c412aa2b 20100613190245 plugins/Color_Inspector_3D.jar
  1a992dbc077ef84020d44a980c7992ba6c8edf3d 20100613190247 plugins/Daltonize_.jar
  b73a16189c15d0e5f59d0b9da7d9dafc19177379 20110209165228 plugins/Differentials_.jar
  b2ef2c55503e2a4b036a97c5576afa723a119ecb 20110726172455 plugins/Directionality_.jar
  83caa3dfc56cba0ff2a4ec8a2532dd674784d356 20110209165230 plugins/Examples/Add_Popup_Split_Channels.bsh
  f6fcfac7beaaf48901cf57d1dd5a9232d6e43570 20100609192423 plugins/Examples/Anaglyph_for_Red_Cyan_glasses.rb
  5dcd79ab303b72dbd5540b604bd30ce0e2a5ddcb 20100609192423 plugins/Examples/Blobs_Demo_in_Ruby.rb
  73eff73688cbf8356485d4dac6fe2b26db598e93 20100609192423 plugins/Examples/Command_Launchers/Command_Launcher_BeanShell.bsh
  95549b2f2f2c42a8bf5bb5f6d18f58d25c4c06cc 20100609192423 plugins/Examples/Command_Launchers/Command_Launcher_Clojure.clj
  dceba709afa80f33ae5d0091f5811b32610e1fd0 20100609192423 plugins/Examples/Command_Launchers/Command_Launcher_Javascript.js
  e4954eacd4b1b679813c4227563996121f7e6d98 20100609192423 plugins/Examples/Command_Launchers/Command_Launcher_Python.py
  f51112123ed16a9ff9c0cf5002dea3804731a8cb 20100609192423 plugins/Examples/Command_Launchers/Command_Launcher_Ruby.rb
  77c7bef5e629a85ae8b037caf2377cb6772f59df 20110223151013 plugins/Examples/Delayed_Snapshot.py
  5536e038a497982f3e10d924849c4ffe6c4fdd3c 20110223151026 plugins/Examples/Delayed_Snapshot_Window.bsh
  4164c08c7ef62e27e731d45643a1cbe10098fce1 20100609192423 plugins/Examples/Edit_LUT_As_Text.py
  780e948e100ffc6bfcd5583146752eff86671b39 20110209165232 plugins/Examples/Extended_Profile_Plot.bsh
  b8881af27131bb518e2c8f45510811963f091e21 20100609192428 plugins/Examples/Fiji_Cube.ijm
  3687a018e780919fc238a411c0d76607060ae47f 20100609192423 plugins/Examples/Fiji_Logo_3D.js
  998cb71706d82992543115b6ad1b85f7d199d096 20100609192423 plugins/Examples/Find_Dimension_of_Raw_Image.py
  66cf50fd8cefccf7056e7dd53f946e195392d4ab 20110627134346 plugins/Examples/Image_To_Tool_Icon.bsh
  ccccc81ed242c08cf81b2c9da3f2b6d8c2e6e278 20110627134338 plugins/Examples/Multithreaded_Image_Processing.clj
  720c237bd586550b63e2d423d2e85759e045869c 20100609192423 plugins/Examples/Multithreaded_Image_Processing_in_Javascript.js
  92ce736dc63c171342bce7b382fa0450394dffc9 20110627134338 plugins/Examples/Plasma_Cloud.rb
  9efb229268bb88ae20f4b2bca157e73c0c0afbdf 20100609192423 plugins/Examples/Same_Slice_in_Multiple_Images.rb
  1b6eee3ac18ab226fb3d5151d04b38308a22d2cf 20110411134741 plugins/Examples/TrakEM2_Example_Scripts/Homogenize_Ball_Radius.py
  940f6500947184db3dfbcad055aa98c11db41c24 20100609192424 plugins/Examples/TrakEM2_Example_Scripts/Measure_AreaLists.py
  3f4bba61fc90eb79a8ade2a6399cad72ede26fb9 20100609192424 plugins/Examples/TrakEM2_Example_Scripts/T2_Select_All.py
  72f0094941e8aae9c451161f05a67f6516d70a55 20100609192424 plugins/Examples/TrakEM2_Example_Scripts/T2_set_all_transforms_to_identity.py
  89ef030758e89f6a6767ab5e3513ee82a8e54127 20100609192428 plugins/Examples/TrakEM2_Example_Scripts/extract_stack_under_arealist.py
  6af490cdb6e2c42e87076b85796dc824203b6e8a 20100609192424 plugins/Examples/blend_two_images.clj
  0989cf7430916a9e0c9f004bc2d5bc6b276e2775 20100609192424 plugins/Examples/celsius_to_fahrenheit.clj
  ff3b990238ad1f85e4a8aa8135e2e3b1221b43a8 20100609192424 plugins/Examples/chess_.py
  4193ae7c8fbe191bff50f19367c5cfa5e0048fbe 20100609192424 plugins/Examples/downsample_.js
  66a204d61b3076d96797ca04671180ed83ebf866 20100609192424 plugins/Examples/list_all_threads.py
  6c86493c27f859bd52ad85581479e5f06655ce0d 20110223151013 plugins/Examples/random_noise_example.clj
  cfe67a037f4f8dc6089047456fa5db89dc2155a4 20110215152100 plugins/ExtendedDepthField.txt
  e48eee8c5bedb45660ef94930f7931d0984cf606 20110726172457 plugins/Extended_Depth_Field.jar
  650f19766157bdd8d35f67ea474a57ed1b4c24f7 20110315163758 plugins/FeatureJ_.jar
  32aabe78307ac40b391428e2fd9d7c6b19eed604 20110726172457 plugins/Feature_Detection.jar
  77dbfdb93eac55cb0affb28efdac66c2ab8ee728 20110627134339 plugins/Fiji_Developer.jar
  dfe56fa3e13f85c9b03fbe54ae10caee970c711c 20110901155123 plugins/Fiji_Plugins.jar
  e03f1808e0a9e2113077e3300a4a41de1d9dccf6 20110901155057 plugins/Fiji_Updater.jar
  d53247c86445afc29f991a39cb39b79f2f3fd4c1 20100613190251 plugins/FlowJ_.jar
  94559184bb4bf02414286cb9d20b95dd8806bd32 20110209165227 plugins/Graph_Cut.jar
  42556198e68860b4135544fe9e4687c9fbffbfe2 20100613190252 plugins/Gray_Morphology.jar
  e8f24a89734ea514ba6405423368a107f324fc5b 20100613190247 plugins/IJ_Robot.jar
  f4180af7f020de621fd0263323f7f757ad63bec7 20110810141442 plugins/IO_.jar
  0b192ea98d65b21fe6b89e16d99492f2bb749bf5 20110315163749 plugins/Image_5D.jar
  556aa2baca4b32676b2a5a5c986f0f2b5c44d03d 20110810141449 plugins/Image_Expression_Parser.jar
  43bb3a7b79d1fc23958a7775f407fa9567c6f67f 20100613190246 plugins/Interactive_3D_Surface_Plot.jar
  3ea0d59d5878d1eeed2f7e1796b504b28ff1818a 20100613190254 plugins/IsoData_Classifier.jar
  28582f554fdbc4905b5ca4eb192a516202b2f334 20100609192424 plugins/JRuby/imagej.rb
  6d537b584457026203446d7e15292a3118a156f2 20110726172450 plugins/JRuby_Interpreter.jar
  0384fcf1924f7e512c15ceb5c38275f822b590a6 20110209165209 plugins/Javascript_.jar
  7c039e95cd514cf9bdf2e325122c4cdbf9fbd07d 20110223150917 plugins/Jython_Interpreter.jar
  6a089d626a3c4d6bf43ffaa1e5c0406ae3d7ff79 20110428144852 plugins/LSM_Reader.jar
  de0f4b6754561dc8a412f2d2c67ec10351f5d238 20110223150918 plugins/LSM_Toolbox.jar
  7dcbc0831ee6cec3b79e90e8b292d25b34174e54 20110315163758 plugins/Lasso_and_Blow_Tool.jar
  fe3c88710e380c7a741cbf676cf5d8144e7edb8a 20110209165230 plugins/Linear_Kuwahara.jar
  bcb926fe63b7637bd53e3602feda2166951acdec 20100613190252 plugins/LocalThickness_.jar
  1a6345a290ff4a28ac4215cbb47fc561dcc886be 20100613190249 plugins/MTrack2_.jar
  2e7c5f2d14a85c9a073074d5540aef234cb3cea5 20110223150918 plugins/M_I_P.jar
  65a2dd7816efceb28030dc0ea7cb4ad51c42e9a0 20100609192424 plugins/Macros/About_Plugin_Macros.txt
  dff5642dcb662c06fd8cd7dfce73f60a4b8b8244 20100609192424 plugins/Macros/Bulls_Eye.txt
  e7ffe8ba782ce90d3b80ad882c474ab1836b58a4 20100609192424 plugins/Macros/Polygon_.txt
  39f7ffcd9b21888b618524a811eb39c93625578d 20100609192424 plugins/Macros/RGB_Histogram.txt
  3ee0edfae7b40189254e38a6ed8108c52859bc33 20100609192424 plugins/Macros/batch_convert_any_to_tif.txt
  d0cd293b359b7bcdf390e560dc28f68fa8033677 20100613190254 plugins/Manual_Tracking.jar
  de3a020be174270600534345eb47fd76267d8080 20110209165228 plugins/MosaicJ_.jar
  d282429b4edade4bc6df44e03d239e8aab2f03a6 20110901155125 plugins/PIV_analyser.jar
  c0e6e54ff0ec7c62350f232af75c85ca7006b51f 20110209165228 plugins/PointPicker_.jar
  32d24a273fef021b079fc64f151c2436af700b30 20110223151026 plugins/QuickPALM_.jar
  174a4b19524f15ff22356cb08dbef7f4e1f550c1 20100613190254 plugins/RATS_.jar
  b1a406f658f5b62633275c8316849532a0d90797 20110315163757 plugins/RandomJ_.jar
  0ab9e3b0886ae1aab0651865d98473295f2cc715 20100613190251 plugins/Record_Screen.jar
  fcdaed5434850ed7987ea6b67817520fd6593d06 20110901155126 plugins/Refresh_Javas.jar
  572251318438ec22aec9c0121cfb484fee56b69a 20110901155238 plugins/SPIM_Registration.jar
  d8cf629d370ad131b753d8b549c3f7525c4ccbbd 20110627134345 plugins/Samples_.jar
  6a6ef70cae816f1f3241dd54572fafec631e9ddd 20110901155146 plugins/Script_Editor.jar
  c70b2e6f4dbfcd1183c3027c924069866095c940 20110315163800 plugins/Scripts/File/Open_Samples/Adelsons_Squares.ijm
  943b100eff4798a466a85a87d3cf7a94f9b9be59 20110627134346 plugins/Scripts/File/Open_Samples/Spirals_.ijm
  a3edd6db28d98349de92ec85b28c015768f782a5 20110315163800 plugins/Scripts/Image/Adjust/Scale_to_DPI.js
  209aed5232d40e0b4bcd237750383865dd07b0d3 20110315163800 plugins/Scripts/Image/Color/Set_Color_By_Wavelength.ijm
  9438c99f9d79c68efee9799a185852d434d32a7e 20110627134346 plugins/Scripts/Image/Hyperstacks/Temporal-Color_Code.ijm
  d3841c4a5d74295cd73b547aaa85961682805c83 20110315163800 plugins/Scripts/Plugins/Registration/Correct_3D_drift.py
  e7e6c262a7d9a2c9f55ac3718b7084a7945e0e2a 20110627134345 plugins/Series_Labeler.jar
  50ee8cf26b2e4bf1b9774a83d227fae873158ef8 20110209165228 plugins/SheppLogan_.jar
  80c8cb32f868773b4def4e8feb668e0bd3ab1f18 20110627134344 plugins/Simple_Neurite_Tracer.jar
  265850b38137898969ca510b0cb1e5e2536f4226 20100613190242 plugins/Siox_Segmentation.jar
  1a5f4c622997d1d23f1d08c81c46b80b4da05d47 20100613190248 plugins/Skeletonize3D_.jar
  e71b5942e5343cbc3d591f249cc9f3dfc73c7e29 20110209165229 plugins/Snakuscule_.jar
  41d82921719c38520d5472a3608b79394db1b7b0 20100613190244 plugins/SplineDeformationGenerator_.jar
  b5a0eabcb770437c30575d4ea6f5dbd346b8bd89 20110209165228 plugins/StackReg_.jar
  f3ea87f06422e3ac55dd3751c2c0346bc9c43261 20110517141209 plugins/Stack_Manipulation.jar
  23cae80cce99d71dc4669da51c6909c3a7ca68ca 20100613190249 plugins/Statistical_Region_Merging.jar
  de9d8f66b1cdde3a6a276e1824d36363fcb79295 20110627134314 plugins/Stitching_.jar
  f05089fa82aca755fea1268bff7f63793692e5c8 20100613190251 plugins/Sync_Win.jar
  b60eef5d020c0e881b4bb97d1579339e1cb2a60e 20110315163758 plugins/Thread_Killer.jar
  f5b2c18843647be28a96a3e7d163a7f2f970921b 20100613190249 plugins/Time_Stamper.jar
  22fd045b2a57d7ed84b5dcb7b6146484143e36fc 20110223150919 plugins/ToAST_.jar
  85cde3427627d577408abbd947525da4d37bc1bd 20110627134345 plugins/TopoJ_.jar
  04158fe00b699f310c92006a745d6fe90f76a440 20110901155233 plugins/Trainable_Segmentation.jar
  d6bef87f12b6e6eddbf9be7b4f53eba3135db9b3 20110803162425 plugins/TrakEM2_.jar
  39d4aaafb0c6bea4ef6cdf95bcaf2c4665d9bdc2 20110223150921 plugins/TransformJ_.jar
  09868b512410628e06c7dc25a6999c7dda8cf078 20100613190249 plugins/TurboReg_.jar
  9558400db089262849c33428a77645c323390145 20110209165228 plugins/UnwarpJ_.jar
  a32dfe463fa2c8814cb0caf9079478ff4e1c44bf 20100609192424 plugins/Utilities/Close_All_Without_Saving.txt
  917b239c542f7304f6e7b919ec30d32cf0567e60 20110901155142 plugins/VIB_.jar
  d6cf9638dc212f49fc3d2d4e99ca7aedc78956a2 20100613190251 plugins/Video_Editing.jar
  a43c9ad3f07dbfa56be075a9ebdcfa115f6675c8 20100613190246 plugins/View5D_.jar
  b8c3af50365b12b0beb010f1c35134cbd310341a 20100613190247 plugins/Volume_Viewer.jar
  39fa825afb7b2156242faa53a7cc996fc338b14c 20110428144829 plugins/bUnwarpJ_.jar
  659ad6a335b4947eef8758b1b0cf050779430b78 20100613190238 plugins/ij-ImageIO_.jar
  06097e6d24c69a9ca3e2c8a18971639419147dbf 20110209165210 plugins/level_sets.jar
  7eb2c883d4669cff4c28a399c54e561aea0842eb 20110627134336 plugins/loci_tools.jar
  8e1e5a8154e05f7d9307c38d32aa7c692f32cda3 20110808123818 plugins/mpicbg_.jar
  5e32d936ba53c22ba6b70e5eee3992a361bc2ff8 20110209165234 plugins/panorama_.jar
  649c04778ed2cbab0754293a50d309ba9c82e963 20110726172452 plugins/register_virtual_stack_slices.jar
  4d7eaf239c033d305a464a06c3e64c68d096c7e1 20100613190242 plugins/registration_3d.jar
  e6e0879f5d50afa8d0dd213b4b66e396a39a47b7 20100609192426 retro/backport-util-concurrent-3.1.jar
  e250f0c40b768e90ed7d3910d9869075f3e438cd 20100609192426 retro/retrotranslator-runtime-1.2.7.jar
  eea1390da8fac38763ed4c03f1acb3342b942717 20100609192426 retro/retrotranslator-transformer-1.2.7.jar
  d7160d38a0b805381cb0c0dcedd60e197e247897 20110808123819 scripts/InstallJava3D.m
  05a92a3c3f518ec50976326bf16a8a8858af2183 20110726172458 scripts/IsJava3DInstalled.m
  089187f510dfdb884a0117bb3365a73f3536fce5 20110726172458 scripts/Matlab3DViewerDemo_1.m
  25be149fecd1f6551b9b0ad53946642db65d5a4e 20110815115122 scripts/Matlab3DViewerDemo_2.m
  815ede59a0509db35e93e51b5b46b8935917f12b 20110815115122 scripts/Matlab3DViewerDemo_3.m
  c2b2bb947e274e24ba12a7e36f53e7c486257491 20110815115122 scripts/Matlab3DViewerIntroduction.m
  c616b472458ac954a5945ab96a43362a7d0982b9 20110726172457 scripts/Miji.m
  868cd43462fefc57c310656d4b35a028f0bda4f4 20110803162425 scripts/Miji_Test.m
  d326018044a582f5106efc6fc90ad09f98a6a822 20100609192426 scripts/Record_Desktop.py
  0ea7f8fc6683e74065ae7fd82c1b92676e069526 20100609192426 scripts/Record_Window.py
  dc94c3a32b5edb3106ad7f2c7c68a852d064089a 20110411134741 scripts/bfopen.m
Comment 1 Johannes Schindelin 2011-09-02 00:17:38 CDT
On the MacOSX version I tested (and for which the bug was reported), the _file extension_ was stripped always. Clearly, this is a bug and needs to be worked around.

But Wayne reported the same as you: that the bug was fixed in the meantime.

However, I am at a loss how to find out _which_ version of Java on MacOSX had the bug fixed. I tried to pry this information from Apple's website for several hours, without luck. If you could help me by finding out, that would be smashing!
Comment 2 Matt Wyczalkowski 2011-09-02 00:32:54 CDT
(In reply to comment #1)
> On the MacOSX version I tested (and for which the bug was reported), the _file
> extension_ was stripped always. Clearly, this is a bug and needs to be worked
> around.
> 
> But Wayne reported the same as you: that the bug was fixed in the meantime.
> 
> However, I am at a loss how to find out _which_ version of Java on MacOSX had
> the bug fixed. I tried to pry this information from Apple's website for several
> hours, without luck. If you could help me by finding out, that would be
> smashing!
> 

I don't expect that this will be very helpful since you're probably already aware of it, but here is a release notes page for Apple Java versions:
http://developer.apple.com/library/mac/navigation/index.html?filter=java#section=Resource%20Types&topic=Release%20Notes

Thanks for your help, and good luck.

Matt
Comment 3 Johannes Schindelin 2011-09-02 01:23:17 CDT
I am glad that this is no longer an issue for you, because I do not have to fix it, then :-)
Comment 4 Matt Wyczalkowski 2011-09-02 01:54:37 CDT
(In reply to comment #3)
> I am glad that this is no longer an issue for you, because I do not have to fix
> it, then :-)
> 

The issue of inconvenience remains, but this is not a critical bug.
Comment 5 Johannes Schindelin 2011-09-02 16:52:15 CDT
Sorry, I should have been more clear: I am only prepared to invest time to solve this bug if you are prepared to invest as much time as I already did. So: as soon as you tell me what version of Java for MacOSX fixed the extension-stripping bug, I will add the appropriate code and let you test and then publish the fixed version.
Comment 6 Johannes Schindelin 2011-09-03 00:00:52 CDT
So I am a moron and I spent another 2 hours on this issue, without any outside help.

To my defense: I happened to get a computer with MacOSX 10.7.1 installed, so it is natural to get tempted to see whether the problem persists.

The big problem is that this problem is not solvable, thanks to Apple's fantastic Java support. Let me illustrate why:

When I load the Blobs example and try to save as TIFF, I indeed see "blobs.tif.stripThis". But when I change the code not to append the ".stripThis", I only see "blobs". Worse: the FileDialog checks for the very same file name (_without_ ".tif" suffix!) in the overwrite check!

Therefore I tried to append a known suffix, ".tif". In effect, I set the file name to "blobs.tif.tif" in the vain hope that MacOSX' FileDialog would only strip the latter. But what it actually does is to strip _both_ suffixes. Ending up with the same "blobs" file name without proper extension.

Now, I could remove the ".stripThis", but most users would think that they do not need to add the proper suffix themselves. Indeed, this was the very reason I put that code there: a real user (a quite bright scientist) saved some images as TIFF files and was unable to load the same files into PowerPoint (which requires the proper extension).

So I am afraid that I'd rather err by adding a ".stripThis" extension than have confused users who think that the computer is clever and does not show them the ".tif" extension. Sorry.
Comment 7 Curtis Rueden 2011-09-03 00:36:23 CDT
I talked with Johannes a bit about this issue, and it really is pretty nasty to fix. However, one workaround to this issue is to go to Edit > Options > Input/Output and check the "Use JFileChooser to open/save" box. Then the problem does not occur, but you have to deal with the less featureful Swing file chooser.
Comment 8 Jan Eglinger 2011-09-15 10:39:48 CDT
(In reply to comment #6)
> So I am afraid that I'd rather err by adding a ".stripThis" extension than have
> confused users who think that the computer is clever and does not show them the
> ".tif" extension. Sorry.
> 

Does the recent bugfix in ImageJ 1.45o change anything regarding this issue??

"Thanks to Gilles Carpentier, fixed a bug that sometimes caused images with extra periods in their names to be saved without an extension."

I talked to users who were rather confused by the ".stripThis" extension that appears whenever they save a results table (.xls.stripThis), a new script (.ijm.stripThis), etc.
and I'm afraid that this change adds more confusion than it solves...

Cheers,
Jan

Comment 9 Curtis Rueden 2011-09-20 17:18:27 CDT
*** Bug 365 has been marked as a duplicate of this bug. ***
Comment 10 Wayne Rasband 2011-09-20 19:43:34 CDT
Use Help>Update ImageJ to upgrade to ImageJ 1.45p. It does not append "stripThis" to default file names and it does not allow files to be overwritten without asking.