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Bug 394 - Simple Neurite Tracer froze on filling out a path
Simple Neurite Tracer froze on filling out a path
Status: RESOLVED WONTFIX
Product: Fiji
Classification: Unclassified
Component: Plugins
unspecified
PC Linux
: P4 normal
Assigned To: ImageJ Bugs Mailing List
Depends on:
Blocks:
 
Reported: 2012-01-13 23:15 CST by Albert Cardona
Modified: 2012-05-12 06:32 CDT
1 user (show)

See Also:

Description Albert Cardona 2012-01-13 23:15:04 CST
The dialog to control the filling out didn't show, and the GUI froze.

(By the way, if the fill dialog is closed, is there any way to bring it back to push the pause button?)


"Run$_AWT-EventQueue-0" prio=10 tid=0x00007fc648726000 nid=0x463a waiting on condition [0x00007fc647af5000]
   java.lang.Thread.State: WAITING (parking)
	at sun.misc.Unsafe.park(Native Method)
	- parking to wait for  <0x000000031b7796c8> (a java.util.concurrent.FutureTask$Sync)
	at java.util.concurrent.locks.LockSupport.park(LockSupport.java:158)
	at java.util.concurrent.locks.AbstractQueuedSynchronizer.parkAndCheckInterrupt(AbstractQueuedSynchronizer.java:811)
	at java.util.concurrent.locks.AbstractQueuedSynchronizer.doAcquireSharedInterruptibly(AbstractQueuedSynchronizer.java:969)
	at java.util.concurrent.locks.AbstractQueuedSynchronizer.acquireSharedInterruptibly(AbstractQueuedSynchronizer.java:1281)
	at java.util.concurrent.FutureTask$Sync.innerGet(FutureTask.java:218)
	at java.util.concurrent.FutureTask.get(FutureTask.java:83)
	at ij3d.Image3DUniverse.addContent(Image3DUniverse.java:1711)
	at ij3d.Image3DUniverse.addCustomMesh(Image3DUniverse.java:1142)
	at ij3d.Image3DUniverse.addTriangleMesh(Image3DUniverse.java:1329)
	at tracing.Path.addTo3DViewer(Path.java:2302)
	- locked <0x00000003ed3e6fb0> (a tracing.Path)
	at tracing.PathAndFillManager.addPath(PathAndFillManager.java:654)
	- locked <0x00000003ed48ecd8> (a tracing.PathAndFillManager)
	at tracing.PathAndFillManager.addPath(PathAndFillManager.java:624)
	at tracing.PathWindow$2$1.run(PathWindow.java:149)
	at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
	at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:641)
	at java.awt.EventQueue.access$000(EventQueue.java:84)
	at java.awt.EventQueue$1.run(EventQueue.java:602)
	at java.awt.EventQueue$1.run(EventQueue.java:600)
	at java.security.AccessController.doPrivileged(Native Method)
	at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87)
	at java.awt.EventQueue.dispatchEvent(EventQueue.java:611)
	at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
	at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
	at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
	at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)


Information about your version of Java - this information is useful for the Fiji developers:

  os.arch => amd64
  os.name => Linux
  os.version => 2.6.32-37-generic
  java.version => 1.6.0_25
  java.vendor => Sun Microsystems Inc.
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.6.0_25-b06
  java.vm.name => Java HotSpot(TM) 64-Bit Server VM
  java.vm.version => 20.0-b11
  java.vm.vendor => Sun Microsystems Inc.
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.X11GraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.6
  sun.cpu.endian => little
  sun.desktop => gnome
  file.separator => /

The up-to-date check says: You wanted never to be reminded.

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to: /home/pogo/Programming/fiji/java/linux-amd64/jdk1.6.0_25/jre
  ij.dir => /home/pogo/Programming/fiji

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Comment 1 Johannes Schindelin 2012-05-12 06:32:49 CDT
Changing the status to reflect reality.