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Bug 882 - Sealing violation when running Simple Neurite Tracer
Sealing violation when running Simple Neurite Tracer
Status: RESOLVED FIXED
Product: Fiji
Classification: Unclassified
Component: Plugins
unspecified
Macintosh Mac OS
: P4 major
Assigned To: ImageJ Bugs Mailing List
Depends on:
Blocks:
 
Reported: 2014-08-06 10:32 CDT by amanton
Modified: 2014-08-07 06:44 CDT
2 users (show)

See Also:

Description amanton 2014-08-06 10:32:31 CDT
Trying to run Simple Neurite Tracer results in the error:

java.lang.SecurityException: sealing violation: package javax.media.j3d is sealed at java.net.URLClassLoader.defineClass(URLClassLoader.java:234)

This appears to happen with both Apple and Oracle Java and with a number of different Fiji versions, on Mac OS X 10.9.4 and 10.7.5.

Information about your version of Java:

  os.arch => x86_64
  os.name => Mac OS X
  os.version => 10.9.4
  java.version => 1.6.0_65
  java.vendor => Apple Inc.
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.6.0_65-b14-462-11M4609
  java.vm.name => Java HotSpot(TM) 64-Bit Server VM
  java.vm.version => 20.65-b04-462
  java.vm.vendor => Apple Inc.
  java.vm.info => mixed mode
  java.awt.graphicsenv => apple.awt.CGraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.6
  sun.cpu.endian => little
  sun.desktop => null
  file.separator => /

The up-to-date check says: UP_TO_DATE

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to: null
  imagej.dir => /Applications/Fiji.app

Information about the version of each plugin:

Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20140802165300)
Fiji: http://fiji.sc/update/ (last check:20140730200634)

Files not up-to-date:
  ed7019fd (MODIFIED) 20140725212049 Contents/Info.plist
  3abf4e77 (MODIFIED) 20140804094045 jars/ij-1.49d.jar
Comment 1 Curtis Rueden 2014-08-06 13:09:44 CDT
This is a problem with your Java3D installation (or lack thereof). Have you tried running the 3D Viewer, and allowing it to download a newer Java3D? That fixed it for another user reporting the same problem: bug #755.
Comment 2 amanton 2014-08-07 06:44:37 CDT
Thanks, that fixed it, although I'm still a little puzzled as I had previously downloaded Java3D from scratch to see if an old version was the problem.