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Bug 926 - Error: Java.lang.ArrayIndexOutOfBoundsException:-1
Error: Java.lang.ArrayIndexOutOfBoundsException:-1
Status: NEEDSINFO
Product: Fiji
Classification: Unclassified
Component: Plugins
unspecified
PC Windows
: P5 enhancement
Assigned To: ImageJ Bugs Mailing List
Depends on:
Blocks:
 
Reported: 2014-09-03 07:17 CDT by Lily
Modified: 2014-09-03 19:10 CDT
1 user (show)

See Also:


Attachments
The virtual stack I used (1.44 MB, application/x-zip-compressed)
2014-09-03 19:10 CDT, Lily

Description Lily 2014-09-03 07:17:00 CDT
When I use the 'Register Virtual Stack' to perform image registration for a virtual stack, it appeared 'Error: Java.lang.ArrayIndexOutOfBoundsException:-1' after I do all the settings including 'Shrinkage Constraint' and then click 'OK'. The Fiji version I used is Fiji Life-Line version, 2014 June 2. I even tried older versions but the same problem. Could you please help me solve this problem?
Comment 1 Johannes Schindelin 2014-09-03 10:12:43 CDT
It is tempting to copy and paste only the first line of an error message because the rest looks confusing to non-programmers. Nevertheless, it makes it impossible to make heads or tails of this issue.

Also, it would be good if you could provide a minimal example to reproduce the issue, i.e. as small as possible an image stack (preferably from File>Open Samples if you can trigger this problem) and a recorded macro that results in said exception every time you run it.
Comment 2 Lily 2014-09-03 19:10:48 CDT
Created attachment 213
The virtual stack I used

run("Register Virtual Stack Slices", "source=C:\\Users\\Alex\\Desktop output=C:\\ feature=Rigid registration=[Rigid                -- translate + rotate                  ] shrinkage");