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Bug 941 - Fiji Core Dumped while doing multiview deconvolution
Fiji Core Dumped while doing multiview deconvolution
Status: NEW
Product: Fiji
Classification: Unclassified
Component: Other
unspecified
PC Linux
: P5 enhancement
Assigned To: ImageJ Bugs Mailing List
Depends on:
Blocks:
 
Reported: 2014-10-08 02:46 CDT by Stephan Janosch
Modified: 2014-10-08 03:54 CDT
1 user (show)

See Also:


Attachments
Core Dump (88.58 KB, text/x-log)
2014-10-08 02:46 CDT, Stephan Janosch

Description Stephan Janosch 2014-10-08 02:46:20 CDT
Created attachment 218
Core Dump

I wonder, how a plugin can crash the whole VM. That's why I file this bug, because a plugin should die via an exception or something. Core dumps look more serious to me.

I used the deconvolution step of this plugin when Fiji core dumped:
http://fiji.sc/Multiview-Reconstruction

Thanks for all the efforts!


------------------------
thread 140225450743552 also had an error][thread 140225321858816 also had an error][thread 140225321858816 also had an error]#
[thread 140225326069504 also had an error][thread 140225326069504 also had an error][thread 140225326069504 also had an error][thread 140225330280192 also had an error][thread 140225330280192 also had an error]# A fatal error has been detected by the Java Runtime Environment:


[thread 140225330280192 also had an error]

[thread 140225330280192 also had an error][thread 140225330280192 also had an error][thread 140225330280192 also had an error]


#
#  [thread 140225323964160 also had an error]SIGSEGV[thread 140225323964160 also had an error]
 (0xb)
 at pc=0x00007f88c9e97c32, pid=8043
, tid=140225452848896
#
# JRE version: 6.0_24-b07
[thread 140225323964160 also had an error]# Java VM: Java HotSpot(TM) 64-Bit Server VM (19.1-b02 mixed mode linux-amd64 )
# Problematic frame:
# 




[thread 140225323964160 also had an error]
V  [libjvm.so+0x64ec32]
Comment 1 Johannes Schindelin 2014-10-08 03:54:59 CDT
> JRE version: 6.0_24-b07

You might want to try with newer Java versions: http://fiji.sc/FAQ#How_do_I_launch_ImageJ_with_a_different_version_of_Java.3F