Hello,

I have found a pb with my ScientiFig FIJI update site, it lists "plugins/Series_Labeler-2.0.0-SNAPSHOT.jar" and "plugins/Scripts/Plugins/Utilities/Record_Window.py" as part of ScientiFig, although those plugins are not mine. I downloaded the following file (http://sites.imagej.net/Aigouy/db.xml.gz), unzipped it and opened it with a text editor and could find the following entries:

<pluginRecords>
    <plugin filename="plugins/Scripts/Plugins/Utilities/Record_Window.py">
        <version checksum="9d4d012ab3325fb24ab3ae0957c2aea663c6dd12" timestamp="20120808233219" filesize="5853"/>
        <previous-version timestamp="20120808233219" checksum="9d4d012ab3325fb24ab3ae0957c2aea663c6dd12" filename="plugins/Scripts/Plugins/Utilities/Record_Window.py"/>
    </plugin>
    <plugin filename="plugins/Series_Labeler-2.0.0-SNAPSHOT.jar">
        <category>annotation</category>
        <version checksum="8cb22fe2deca014a2f6ec1efd12b09b95b994cc3" timestamp="20140225152316" filesize="32677">
            <description>This plugin allows the user to put a customizable time code into time series.

</description>
            <dependency filename="jars/ij.jar" timestamp="20101201163152"/>
            <link>http://pacific.mpi-cbg.de/Series_Labeler</link>
            <author>Daniel James White</author>
            <author>Tom Kazimiers</author>
        </version>

I don't think I have ever uploaded those files with my plugin (otherwise this would be by mistake and obviously thoses plugins are not present in my http://sites.imagej.net/Aigouy file list), so I assume it is/was a bug of the FIJI/IJ updater, my question is can some administrator edit my db.xml.gz file to remove those entries or tell me how I can fix that by myself. This is important for me to solve this soon since some of my users cannot use my update site (they get an error when the FIJI updater tries to download the series_labeler.jar that does is not present on my update site).

many thanks and happy new year,

benoit

Information about your version of Java:

  os.arch => amd64
  os.name => Linux
  os.version => 3.16.0-28-generic
  java.version => 1.6.0_24
  java.vendor => Sun Microsystems Inc.
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.6.0_24-b07
  java.vm.name => Java HotSpot(TM) 64-Bit Server VM
  java.vm.version => 19.1-b02
  java.vm.vendor => Sun Microsystems Inc.
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.X11GraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.6
  sun.cpu.endian => little
  sun.desktop => gnome
  file.separator => /

The up-to-date check says: UP_TO_DATE

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to: /home/benoit/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre
  imagej.dir => /home/benoit/Fiji.app

Information about the version of each plugin:

Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20141223000235)
Fiji: http://fiji.sc/update/ (last check:20141222142604)
IBMP-CNRS: http://www-ibmp.u-strasbg.fr/fijiupdates/ (last check:20140526164644)
ScientiFig: http://sites.imagej.net/Aigouy/ (last check:20141110150420)

Files not up-to-date:
  a5d02cb7 (LOCAL_ONLY) 20131005162326 plugins/Kymo_graph1001.jar
  f4038092 (LOCAL_ONLY) 20141222150248 plugins/ScientiFig/ScientiFigPrefs.txt
  3ff79941 (LOCAL_ONLY) 20150105131204 plugins/Spb/tutu_.py
  740a32b3 (LOCAL_ONLY) 20140109112924 plugins/SplittedChannelsMerger_.class
  d31ed141 (LOCAL_ONLY) 20131016094131 plugins/Stack_Focuser_.class
  5f60d96e (LOCAL_ONLY) 20140306085844 plugins/Watershed_.jar