How to cite Fiji?short URL
The primary publication for the Fiji project is the following paper from Nature Methods Focus on Bioimage Informatics
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid, Jean-Yves Tinevez, Daniel James White, Volker Hartenstein, Kevin Eliceiri, Pavel Tomancak and Albert Cardona (2012) Fiji: an open-source platform for biological-image analysis, Nature Methods 9(7): 676-682 PDF Supplement
Many plugins have been published separately as summarized on our publications page. If possible, we would like to ask Fiji users to cite both the general publication above as well as the plugin specific paper. However, if journal reference limits interfere, the plugin specific publication should take precedence.
In general, please cite us - the long-term future of the project depends on it!
Thank you for your support.