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Bugzilla – Bug 681 |
getInfo(DICOM_TAG) returns only empty strings |
Last modified: 2014-06-16 15:20:34 CDT |
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NOTICE! This is a static HTML version of a legacy Fiji BugZilla bug. The Fiji project now uses GitHub Issues for issue tracking. Please file all new issues there. |
| getInfo(DICOM_TAG) returns only empty strings | |
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After upgrading from 1.48b to 1.48h getInfo(DICOM_TAG) returns only empty strings. With 1.48b it worked perfectly. getMetadata("Info") works OK also in 1.48h. Any clue why this happens? Best regards, Mats Nilsson Professor Dept of Radiation Physics Skane University Hospital, Sweden Information about your version of Java: os.arch => amd64 os.name => Windows 7 os.version => 6.1 java.version => 1.6.0_24 java.vendor => Sun Microsystems Inc. java.runtime.name => Java(TM) SE Runtime Environment java.runtime.version => 1.6.0_24-b07 java.vm.name => Java HotSpot(TM) 64-Bit Server VM java.vm.version => 19.1-b02 java.vm.vendor => Sun Microsystems Inc. java.vm.info => mixed mode java.awt.graphicsenv => sun.awt.Win32GraphicsEnvironment java.specification.name => Java Platform API Specification java.specification.version => 1.6 sun.cpu.endian => little sun.desktop => windows file.separator => \ The up-to-date check says: PROTECTED_LOCATION Information relevant to JAVA_HOME related problems: JAVA_HOME is set to: C:\PROGRA~1\ImageJ\Fiji.app/java/win64/jdk1.6.0_24//jre ij.dir => C:\PROGRA~1\ImageJ\Fiji.app Information about the version of each plugin: 9b0143f0:6024546f:6024546f 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ImageJ-win64.exe 1faaeed6 20130124131309 images/icon-flat.png acc78381 20130813133855 images/icon.png bc179668 20130813132335 images/icon_mn_röd.png c439cc61 20130124131309 images/icon_original.png c3f8675e 20130124131219 jars/Jama.jar ad44ab73 20130506162000 jars/VIB-lib-2.0.0-SNAPSHOT.jar bd573380 20130124131219 jars/VectorString.jar 8e160955 20130124131219 jars/ant-junit.jar 4124ed0d 20130124131219 jars/ant-launcher.jar b18659ff 20130124131220 jars/ant-nodeps.jar 70c12cd3 20130124131221 jars/ant.jar ff131d48 20130124131221 jars/autocomplete.jar 2daf8bdd 20130416093455 jars/base64-2.3.8.jar 5a0c7964 20130124131226 jars/batik.jar ab79445e 20130124131226 jars/bcmail-jdk14-138.jar d2b52892 20130124131228 jars/bcprov-jdk14-138.jar 38b2c2b9 20131202132106 jars/bio-formats-4.4.9.jar b8d5d243 20131202132128 jars/bio-formats/jai_imageio-4.4.9.jar db279228 20131202132126 jars/bio-formats/scifio-4.4.9.jar 6e312829 20130124131228 jars/bsh.jar 5967b4df 20130124131232 jars/clojure.jar 265cb26d 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plugins/RoengenologicalAttachmentLevelAnalyzer/RoengenologicalAttachmentLevelAnalyzer_.class 4ddf620c 20130124131214 plugins/SPIM_Opener.jar 82fd1820 20131202132107 plugins/SPIM_Registration-2.0.0-SNAPSHOT.jar b9076c0a 20130813085034 plugins/Samples_-2.0.0-SNAPSHOT.jar 6d88799a 20131202132111 plugins/Script_Editor-2.0.0-SNAPSHOT.jar 578994ca 20130813085050 plugins/Scripts/File/Make_Screencast.bsh c70b2e6f 20130124131218 plugins/Scripts/File/Open_Samples/Adelsons_Squares.ijm 60df5674 20130507100758 plugins/Scripts/File/Open_Samples/Spirals_.ijm a3edd6db 20130124131219 plugins/Scripts/Image/Adjust/Scale_to_DPI.js 209aed52 20130124131219 plugins/Scripts/Image/Color/Set_Color_By_Wavelength.ijm 1de6c712 20130813085050 plugins/Scripts/Image/Hyperstacks/Temporal-Color_Code.ijm af064f17 20130906093424 plugins/Scripts/Plugins/Registration/Correct_3D_drift.py a6e496fc 20130310203718 plugins/Scripts/Plugins/Utilities/Create_Desktop_Icon.bsh b5ee58a2 20130318113628 plugins/Scripts/Plugins/Utilities/Find_Jar_For_Class.bsh fc46bd40 20130124131219 plugins/Scripts/Plugins/Utilities/Record_Desktop.py 9d4d012a 20130124131219 plugins/Scripts/Plugins/Utilities/Record_Window.py 186e052c 20130813085055 plugins/Series_Labeler-2.0.0-SNAPSHOT.jar 7c62b5c5 20130813085057 plugins/SheppLogan_-2.0.0-SNAPSHOT.jar 069ebf34 20130124131214 plugins/Sholl_Analysis-3.0.0-SNAPSHOT.jar 95dc5b19 20131202132123 plugins/Simple_Neurite_Tracer-2.0.2-SNAPSHOT.jar 0bd5f179 20130813085049 plugins/Siox_Segmentation-1.0.1-SNAPSHOT.jar 52fecf09 20130813085055 plugins/Skeletonize3D_-1.0.1-SNAPSHOT.jar b0820703 20130813085054 plugins/Snakuscule_-2.0.0-SNAPSHOT.jar 33b6af85 20131202132117 plugins/SplineDeformationGenerator_-2.0.0-SNAPSHOT.jar 27de591e 20130813085035 plugins/StackReg_-2.0.0-SNAPSHOT.jar 736bb192 20130813085043 plugins/Stack_Manipulation-2.0.0-SNAPSHOT.jar 59f36299 20130813085052 plugins/Statistical_Region_Merging-2.0.0-SNAPSHOT.jar 9fe6a5f0 20131202132114 plugins/Stitching_-2.0.0-SNAPSHOT.jar 30100de7 20130813085032 plugins/Sync_Win-1.7-fiji2-SNAPSHOT.jar 685ca9dc 20130813085050 plugins/Thread_Killer-2.0.0-SNAPSHOT.jar 2cee6c37 20130813085032 plugins/Threshold_Colour-2.0.1-SNAPSHOT.jar d822b123 20130129144729 plugins/Time_Stamper-2.0.0-SNAPSHOT.jar 584cb5b9 20130813085057 plugins/ToAST_-25.0.1-SNAPSHOT.jar 4cf59217 20130813085053 plugins/TopoJ_-2.0.0-SNAPSHOT.jar aa018ffb 20131202132110 plugins/TrackMate_-2.1.1-SNAPSHOT.jar 9cd00a0c 20131202132112 plugins/Trainable_Segmentation-2.0.0-SNAPSHOT.jar 59124982 20131202132122 plugins/TrakEM2_-1.0b-SNAPSHOT.jar 8e7f3b79 20130813085033 plugins/TransformJ_-2.8.1-SNAPSHOT.jar c4e87a76 20130813085051 plugins/TurboReg_-2.0.0-SNAPSHOT.jar 9558400d 20130124131217 plugins/UnwarpJ_.jar a32dfe46 20130124131219 plugins/Utilities/Close_All_Without_Saving.txt 253c6df4 20130813085053 plugins/VIB_-2.0.0-SNAPSHOT.jar baa78901 20131202132106 plugins/Vaa3d_Reader-2.0.0-SNAPSHOT.jar 81279d21 20130813085037 plugins/Video_Editing-2.0.0-SNAPSHOT.jar 73396eef 20130813085049 plugins/View5D_-1.3.1-SNAPSHOT.jar 980c0ed9 20130813085057 plugins/Volume_Calculator-1.0.1-SNAPSHOT.jar b9742297 20131202132116 plugins/Volume_Viewer-2.01.1-SNAPSHOT.jar 946cfab0 20130423155006 plugins/Window_Closer.class 2079ca32 20130813085052 plugins/bUnwarpJ_-2.6.1-SNAPSHOT.jar 0307564a 20131202132113 plugins/blockmatching_-2.0.0-SNAPSHOT.jar b8e39c97 20130327111722 plugins/iText-2.1.7.jar 659ad6a3 20130124131217 plugins/ij-ImageIO_.jar 0535650b 20130328090554 plugins/itext-pdfa-5.4.0-javadoc.jar f1c215ea 20130328090555 plugins/itext-xtra-5.4.0-javadoc.jar b1a848e5 20130328090558 plugins/itextpdf-5.4.0-javadoc.jar 82f900ac 20130813085054 plugins/level_sets-1.0.1-SNAPSHOT.jar 2bde09bc 20131202132115 plugins/loci_plugins-4.4.9.jar df2af815 20131202132110 plugins/mpicbg_-0.6.1-SNAPSHOT.jar 5e32d936 20130124131217 plugins/panorama_.jar 2dbeb38d 20130411115139 plugins/pdf_macroext-20130327.jar 96b34801 20130124131217 plugins/readme.txt 27c6f58b 20131202132123 plugins/register_virtual_stack_slices-2.0.0-SNAPSHOT.jar 16012d5a 20130813085057 plugins/registration_3d-2.0.0-SNAPSHOT.jar 34b7341d 20130124131310 retro/backport-util-concurrent-3.1.jar 8759ba20 20130417090916 retro/retrotranslator-runtime-1.2.9.jar a6d5a3b2 20130417090916 retro/retrotranslator-transformer-1.2.9.jar d7160d38 20130124131309 scripts/InstallJava3D.m 05a92a3c 20130124131309 scripts/IsJava3DInstalled.m ff34d026 20130124131309 scripts/Matlab3DViewerDemo_1.m 25be149f 20130124131309 scripts/Matlab3DViewerDemo_2.m cb529b6c 20130124131309 scripts/Matlab3DViewerDemo_3.m 53d2da73 20130124131309 scripts/Matlab3DViewerIntroduction.m 4bb342fa 20130124131309 scripts/Miji.m 868cd434 20130124131309 scripts/Miji_Test.m dc94c3a3 20130124131309 scripts/bfopen.m a77cab39 20130813085100 scripts/importTrackMateTracks.mThis appears to be a Fiji-specific bug. This test macro works as expected with ImageJ: run("CT (420K, 16-bit DICOM)"); key="0008,0060"; print(key+" = "+getInfo(key)); key="0028,1050"; print(key+" = "+getInfo(key)); key="0028,1051"; print(key+" = "+getInfo(key)); key="0028,1052"; print(key+" = "+getInfo(key));