NOTICE! This is a static HTML version of a legacy Fiji BugZilla bug.

The Fiji project now uses GitHub Issues for issue tracking.

Please file all new issues there.

Bug 1051 - ImgPlus.java missing
ImgPlus.java missing
Status: NEEDSINFO
Product: Fiji
Classification: Unclassified
Component: Plugins
unspecified
PC Windows
: P4 normal
Assigned To: ImageJ Bugs Mailing List
Depends on:
Blocks:
 
Reported: 2015-04-03 17:45 CDT by tonimuusimaki
Modified: 2015-04-06 09:56 CDT
3 users (show)

See Also:

Description tonimuusimaki 2015-04-03 17:45:15 CDT
I try to convert an image, it gives:
ImgPlus is required but none exist
In console it says:
[warning] No Widget found for input: in

I found ImagePlus.java class and
saved it and tried to install it. none helped....

Information about your version of Java:

  os.arch => amd64
  os.name => Windows NT (unknown)
  os.version => 6.2
  java.version => 1.6.0_24
  java.vendor => Sun Microsystems Inc.
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.6.0_24-b07
  java.vm.name => Java HotSpot(TM) 64-Bit Server VM
  java.vm.version => 19.1-b02
  java.vm.vendor => Sun Microsystems Inc.
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.Win32GraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.6
  sun.cpu.endian => little
  sun.desktop => windows
  file.separator => \

The up-to-date check says: REMIND_LATER

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to: C:\Users\lk\Desktop\ND_prog\NANODE~1/java/win64/jdk1.6.0_24//jre
  imagej.dir => C:\Users\lk\Desktop\ND_prog\NANODE~1

Information about the version of each plugin:

Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20150328055348)
Fiji: http://fiji.sc/update/ (last check:20150325042333)

Files not up-to-date:
  d2742cca (LOCAL_ONLY) 20150206153804 jars/NDEFManual_.jar
  766df23f (LOCAL_ONLY) 20140403111336 jars/REngine.jar
  b0b42e41 (LOCAL_ONLY) 20140403111332 jars/RserveEngine.jar
  b6bf3817 (OBSOLETE_UNINSTALLED) 20150127132932 jars/edu_mines_jtk.jar
  b3c7e638 (MODIFIED) 20150127132934 jars/ij-1.49m.jar
  eb1fd0b1 (MODIFIED) 20150404002416 jars/ij-1.49q.jar
  8b01478b (LOCAL_ONLY) 20140923122038 jars/ijblob-1.3.jar
  25895ad6 (OBSOLETE_UNINSTALLED) 20150127132934 jars/imglib2-ops-2.0.0-beta-26.jar
  bd1f4461 (LOCAL_ONLY) 20130808112822 jars/jtransforms-2.4.jar
  b7e4ce98 (LOCAL_ONLY) 20150225161810 plugins/HAADF_.jar
  53c5c1ad (LOCAL_ONLY) 20141031171942 plugins/NL_Means_.jar
  24dc6f0f (LOCAL_ONLY) 20150224161802 plugins/Settings_Manager_.jar
  b9a8ca9c (LOCAL_ONLY) 20141201150136 plugins/Shape_Filter_.jar
  e2690a97 (LOCAL_ONLY) 20140819104902 plugins/Shape_Smoothing_.jar
  89193915 (LOCAL_ONLY) 20150224155446 plugins/ijRPlot_.jar
  83cb8345 (LOCAL_ONLY) 20140723164636 plugins/morphology_collection.jar
Comment 1 Mark Hiner 2015-04-04 08:09:45 CDT
What command are you trying to run to convert your image?

That error message is saying that the command requires an image to be opened as an ImgPlus - which typically is only the case when you open an image with an ImageJ2 command.

If you use File > Import > Image... to open an image, are you able to run the convert command? That should open as an ImgPlus. But be aware that when using a command requiring an ImgPlus, you are using beta functionality that may not be fully tested yet.
Comment 2 Curtis Rueden 2015-04-06 09:56:00 CDT
In addition, your installation appears to have a couple of problems. You have an obsolete imglib2-ops-2.0.0-beta-26.jar, which needs to be deleted. You also have two versions of ImageJ1 (ij-1.49m and ij-1.49q) which can cause major problems.

See this article for how to verify your ImageJ is really fully up-to-date:
http://imagej.net/FAQ#How_can_I_verify_that_my_ImageJ_is_really_100.25_up_to_date.3F

See this guide for more on writing a good bug report:
http://imagej.net/Bug_reporting_best_practices