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Bug 1267 - error at imagej program launch
error at imagej program launch
Status: RESOLVED FIXED
Product: Fiji
Classification: Unclassified
Component: Plugins
unspecified
PC Windows
: P4 normal
Assigned To: ImageJ Bugs Mailing List
Depends on:
Blocks:
 
Reported: 2016-05-09 04:11 CDT by daniel sharpe
Modified: 2016-05-09 10:54 CDT
1 user (show)

See Also:
Description daniel sharpe 2016-05-09 04:11:02 CDT 
using imagej - on program launch the following warning/error appears, on clicking "ok" the message disappears and the program seems to launch with no adverse effects

Plugin configuration error \\path\Fiji\plugins\Anisotropic_Diffusion_2D-2.0.0.jar
    Duplicate command: "Anisotropic Diffusion 2D", Anisotropic_diffusion.Anisotropic_Diffusion_2D

Information about your version of Java:

  os.arch => amd64
  os.name => Windows 8.1
  os.version => 6.3
  java.version => 1.8.0_66
  java.vendor => Oracle Corporation
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.8.0_66-b18
  java.vm.name => Java HotSpot(TM) 64-Bit Server VM
  java.vm.version => 25.66-b18
  java.vm.vendor => Oracle Corporation
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.Win32GraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.8
  sun.cpu.endian => little
  sun.desktop => windows
  file.separator => \

The up-to-date check says: CHECK_TURNED_OFF

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to: N:\Fiji/java/win64/jdk1.8.0_66//jre
  imagej.dir => N:\Fiji

Information about the version of each plugin:

Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20160504193521)
Fiji: http://update.fiji.sc/ (last check:20160418162001)
Java-8: http://sites.imagej.net/Java-8/ (last check:20160428170103)

Files not up-to-date:
  945b6a66 (LOCAL_ONLY) 20160429100646 luts/FociPicker_256Colors.lut
  621e2e0c (LOCAL_ONLY) 20160429101448 plugins/Anisotropic_Diffusion_2D.class
  5d44d0ab (LOCAL_ONLY) 20160429101348 plugins/Batch_Statistics.class
  0a2a5833 (LOCAL_ONLY) 20160429100549 plugins/Colocalization_Finder.jar
  0a5c1981 (LOCAL_ONLY) 20160429100558 plugins/Color_Profiler.jar
  07d17c68 (LOCAL_ONLY) 20160429100514 plugins/Contact_Angle.jar
  bf94007f (LOCAL_ONLY) 20160429101026 plugins/CustomAnalyzer.class
  1617f9d1 (LOCAL_ONLY) 20160429100639 plugins/Foci_Picker3D$PixelCollection3D.class
  4f03b5a2 (LOCAL_ONLY) 20160429100635 plugins/Foci_Picker3D.class
  93fb435c (LOCAL_ONLY) 20160429101548 plugins/Mean_Shift.class
  5bb55d56 (LOCAL_ONLY) 20160429100619 plugins/Microscope_Scale.class
  59aed8fe (LOCAL_ONLY) 20160429101021 plugins/Particle_Remover.class
  a350d95a (LOCAL_ONLY) 20160429101219 plugins/Plane_Brightness_Adjustment.jar
  57317a41 (LOCAL_ONLY) 20160429101143 plugins/Polynomial_Surface_Fit.class
  0eb97953 (LOCAL_ONLY) 20160429100522 plugins/RGB_Profiler.class
  306e877c (LOCAL_ONLY) 20160429101530 plugins/Sigma_Filter_Plus.class
  1db1887b (LOCAL_ONLY) 20160429101921 plugins/line_lab_selective_median_filtering_v1_00.jar
Comment 1 daniel sharpe 2016-05-09 10:54:16 CDT 
it seems the class file that was in the same folder as the jar file was the issue - removing the class file solves the issue - no functionality lost