Bug 257 – message at start up

Bug 257 - message at start up


Summary:	message at start up

Status:	RESOLVED FIXED

Product:	Fiji
Classification:	Unclassified
Component:	Plugins
Version:	unspecified
Hardware:	PC Linux

Importance:	P4 normal
Assigned To:	ImageJ Bugs Mailing List

URL:

Depends on:
Blocks:

Reported:	2010-12-02 07:54 CST by Yves Maniette
Modified:	2010-12-02 09:28 CST
CC List:	1 user (show)

See Also:

Description Yves Maniette 2010-12-02 07:54:41 CST

After updating Fiji right now, I have a message at start up, that says the following (I hope I do not make typo while copying):


Plugin configuration error: /home/yves/download/Fiji.app/plugins/ToAST_.jar
Duplicate command: "Malaria Sporozoites (9.2 MB)", ij.plugin.URLOpener("http://pacific.mpi-cbg.de/samples/_malaria_parasites.tif")(already in Samples_.jar)

 Yves Maniette

[Enter details of the problem or bug and how to reproduce it here.]

Information about your version of Java - this information is useful for the Fiji developers:

  os.arch => i386
  os.name => Linux
  os.version => 2.6.32-26-generic-pae
  java.version => 1.6.0_20
  java.vendor => Sun Microsystems Inc.
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.6.0_20-b02
  java.vm.name => Java HotSpot(TM) Client VM
  java.vm.version => 16.3-b01
  java.vm.vendor => Sun Microsystems Inc.
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.X11GraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.6
  sun.cpu.endian => little
  sun.desktop => gnome
  file.separator => /

The up-to-date check says: Up-to-date

Information about the version of each plugin:

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  af0db3750388106d1612ddd20a3e68a4444c4083 20101001040902 jars/VIB-lib.jar
  20d2680eb3755392aa047a1811647f79950bec3f 20100614090437 jars/VectorString.jar
  4199e18036ba2020bdcbc733f603564f41cf9009 20091001002722 jars/ant-launcher.jar
  92b2335d3a97549b633dbcc3c41381a90f2b924b 20091001002722 jars/ant-nodeps.jar
  b1492f77c5c13e4f9dc05fe0ba9f95d6ec826660 20091001002722 jars/ant.jar
  5bab776822719667a604b8fb2eafc679161aeb0f 20100614090451 jars/autocomplete.jar
  dbab80ab5e11fb33328c7da88a849d0a19793ff5 20100614090451 jars/batik.jar
  d21bc3c19ebc5b3924caff5f859e6c50071590c9 20091001002722 jars/bsh-2.0b4.jar
  efd0b4a7eaf55c0716fde3243ac45cb49fdd2606 20091001002722 jars/clibwrapper_jiio.jar
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  d760adf70f63d2f07fe00dc5f36b9bc32f11fc97 20100831193806 jars/commons-math.jar
  368901ce572a723c0ae0e68f0563b2712a69fd5d 20091001002722 jars/edu_mines_jtk.jar
  365fd7dfcf495d2ae303d375d068c0d59eb0b7af 20101001040901 jars/fake.jar
  b83270c64035aba717481a094b1c81559fff1cbd 20100831193759 jars/fiji-lib.jar
  f7e963ce0bb02c9c7c7408e8605dcda5c37d1de3 20100831215017 jars/fiji-scripting.jar
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  12065f36c73057a77a5deeaf4b8beecbe738ce18 20100614090434 jars/javac.jar
  5000664ee8b54ad75a72da627ab7665ca422f10b 20091001002722 jars/jcommon-1.0.12.jar
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  b904075730a195dff53e602e836e6ced7b438257 20101001040850 jars/jruby.jar
  108412260f226609c8161f6e831119f47e6d9380 20091001002722 jars/js.jar
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  4f1f697b80f9fe3981463e6bfb6f9989dccdc5af 20101202154418 jars/mpicbg.jar
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  5cc5e4e537c2c5824beadcb03b7a1d6805e3a42f 20091001002722 jars/postgresql-8.2-506.jdbc3.jar
  ec0fe9713dde3e69b3b41d2219de4a9701047f16 20100831215033 jars/rsyntaxtextarea.jar
  62509dafa2ad38e0e3c34c538f6d3da1e25971ce 20100614090451 jars/weka.jar
  c432f64b204f9657354de2010b24535670e3073b 20090910212726 luts/16_colors.lut
  89419f9999bc7d1dc09ad1a66e04e819396fe09f 20090910212726 luts/5_ramps.lut
  dc3a1bdd2b34edec84c29affaded489d0a22601d 20090910212726 luts/6_shades.lut
  0b3bbb6cf86adcb697c53c0277a12140966375dc 20090910212726 luts/Cyan Hot.lut
  655b55e6322c870632e5ff3156f002c0f5b893fe 20090910212726 luts/Green Fire Blue.lut
  2918f6d391ee38a4491163c30b4e75256a6633e7 20090910212726 luts/HiLo.lut
  a3312d3ff046120cccf5adcd400c512f78d18f93 20090910212726 luts/ICA.lut
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  c9e396a3f83ee8cebf1ed28d3e2d53296cc908e7 20090910212726 luts/brgbcmyw.lut
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  e4561a55e0e167093e5551dddfcb93d8584c29cf 20100831215025 plugins/Stack_Manipulation.jar
  23cae80cce99d71dc4669da51c6909c3a7ca68ca 20100614090500 plugins/Statistical_Region_Merging.jar
  c8ca6b1805fb21baa16d2191b5aea10704c5e589 20100831215026 plugins/Stitching_.jar
  f05089fa82aca755fea1268bff7f63793692e5c8 20100614090501 plugins/Sync_Win.jar
  d8b107e55a178c768452f0e95141d732689ce8e4 20101202154421 plugins/Temporal_Color_Coder.jar
  f5b2c18843647be28a96a3e7d163a7f2f970921b 20100614090500 plugins/Time_Stamper.jar
  ebecddff37b8e47da31f3f7e8d3c081d3b5ca76e 20100614090459 plugins/ToAST_.jar
  5e20cc0a6c833ebfdcd5fc6517eed89a44ae35dc 20100831193806 plugins/TopoJ_.jar
  963f0b325919991a8c31ef06a1c84ad499d52232 20100831215037 plugins/Trainable_Segmentation.jar
  388697eeea49cd689b3972077ca2d57e4e3c2eff 20101001040852 plugins/TrakEM2_.jar
  39d4aaafb0c6bea4ef6cdf95bcaf2c4665d9bdc2 20101001040852 plugins/TransformJ_.jar
  09868b512410628e06c7dc25a6999c7dda8cf078 20100614090459 plugins/TurboReg_.jar
  9558400db089262849c33428a77645c323390145 20101001040903 plugins/UnwarpJ_.jar
  a32dfe463fa2c8814cb0caf9079478ff4e1c44bf 20090910212726 plugins/Utilities/Close_All_Without_Saving.txt
  08258025d1141698097ccdab66cc787609cb544e 20100831215031 plugins/VIB_.jar
  d6cf9638dc212f49fc3d2d4e99ca7aedc78956a2 20100614090501 plugins/Video_Editing.jar
  a43c9ad3f07dbfa56be075a9ebdcfa115f6675c8 20100614090457 plugins/View5D_.jar
  b8c3af50365b12b0beb010f1c35134cbd310341a 20100614090457 plugins/Volume_Viewer.jar
  e9a7358277abe3a90df974fc81d96be9c9a71a9e 20100614090449 plugins/bUnwarpJ_.jar
  659ad6a335b4947eef8758b1b0cf050779430b78 20100614090450 plugins/ij-ImageIO_.jar
  f3989138cbab5258cd8d6d682f93454637060d10 20100831215031 plugins/level_sets.jar
  110647853a7eef67880e36fb7b702237e66e051d 20101001040855 plugins/loci_tools.jar
  a39a5acb2a4422f35cb4a75fd2a24aa74608ebec 20101202154414 plugins/mpicbg_.jar
  a082571fe0be7aa53efa5f94f87577aedbb78c69 20100614090452 plugins/register_virtual_stack_slices.jar
  4d7eaf239c033d305a464a06c3e64c68d096c7e1 20100614090455 plugins/registration_3d.jar
  e6e0879f5d50afa8d0dd213b4b66e396a39a47b7 20090910212729 retro/backport-util-concurrent-3.1.jar
  e250f0c40b768e90ed7d3910d9869075f3e438cd 20090910212729 retro/retrotranslator-runtime-1.2.7.jar
  eea1390da8fac38763ed4c03f1acb3342b942717 20090910212729 retro/retrotranslator-transformer-1.2.7.jar
  d326018044a582f5106efc6fc90ad09f98a6a822 20090910212729 scripts/Record_Desktop.py
  0ea7f8fc6683e74065ae7fd82c1b92676e069526 20090910212729 scripts/Record_Window.py

Comment 1 Johannes Schindelin 2010-12-02 09:20:34 CST

I see that you haven't updated plugins/ToAST_.jar. Please re-run the updater with Help>Update Fiji.

Comment 2 Yves Maniette 2010-12-02 09:28:22 CST

Hello,

 After re-running the Update machine, the system now works smoothly. 

 Thank you very much,