It would seem that when passing a variable using the '&' operator to the run() command within a function the global variable is passed rather than the local variable in the function. This is with the imageJ macro language.


1) Create a new macro
2) Enter the following macro:

newImage("Untitled", "8-bit White", 400, 400, 10);
run("Label...", "format=0 starting=1 interval=1 x=20 y=20 font=18 text=[] range=1-10");

a = 8;
f();
print("a outside f= " + a);

function f(){
	a = 3;	
	run("Slice Remover", "first=&a last=&a increment=1"); //frame 8 gets removed, not 3!!!
	print("a inside f= " + a);
}



3) Run macro. Frame 8 gets deleted, not frame 3, even though the print statement in f() correctly prints 3.


Information about your version of Java - this information is useful for the Fiji developers:

  os.arch => amd64
  os.name => Linux
  os.version => 2.6.16.60-0.69.1-smp
  java.version => 1.6.0_17
  java.vendor => Sun Microsystems Inc.
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.6.0_17-b04
  java.vm.name => Java HotSpot(TM) 64-Bit Server VM
  java.vm.version => 14.3-b01
  java.vm.vendor => Sun Microsystems Inc.
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.X11GraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.6
  sun.cpu.endian => little
  sun.desktop => null
  file.separator => /

The up-to-date check says: You wanted never to be reminded.

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to: /usr/java/jre1.6.0_17
  fiji.dir => /home/richardtyson/Fiji.app

Information about the version of each plugin:

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