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Bug 356 - Maximum memory at 860Mb
Maximum memory at 860Mb
Status: RESOLVED FIXED
Product: Fiji
Classification: Unclassified
Component: Plugins
unspecified
PC Windows
: P4 normal
Assigned To: ImageJ Bugs Mailing List
Depends on:
Blocks:
 
Reported: 2011-08-24 17:36 CDT by olivier bardot
Modified: 2012-02-21 19:25 CST
1 user (show)

See Also:


Attachments
Screen capture freezed Fiji (41.58 KB, image/jpeg)
2012-02-20 10:26 CST, olivier bardot

Description olivier bardot 2011-08-24 17:36:29 CDT
[Hello
I cannot reopen images that I open in July.
I have check : the maximum memory is set to 860Mb.
I have a look at the jvm.cfg file which show "-Xmx1400m".
I do not understand but it seems that came with the last update.]

Information about your version of Java - this information is useful for the Fiji developers:

  os.arch => x86
  os.name => Windows XP
  os.version => 5.1
  java.version => 1.6.0_20
  java.vendor => Sun Microsystems Inc.
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.6.0_20-b02
  java.vm.name => Java HotSpot(TM) Client VM
  java.vm.version => 16.3-b01
  java.vm.vendor => Sun Microsystems Inc.
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.Win32GraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.6
  sun.cpu.endian => little
  sun.desktop => windows
  file.separator => \

The up-to-date check says: Up-to-date

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to: C:\DOCUME~1\olbardot\MESDOC~1\Labo\LOGICI~1\Fiji.app/java/win32/jdk1.6.0_20/jre
  fiji.dir => C:\DOCUME~1\olbardot\MESDOC~1\Labo\LOGICI~1\Fiji.app

Information about the version of each plugin:

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Comment 1 Johannes Schindelin 2011-08-24 22:45:24 CDT
Please try to start Fiji with the command-line option "--no-splash" and report back whether it fixes your issues. You need to start Fiji from the command line to do that, as described here: http://fiji.sc/Command_Line_Debugging
Comment 2 Johannes Schindelin 2011-08-26 15:07:14 CDT
Sory, my misstake, I missspellt the paage naame ;-) Please try again :-)
Comment 3 Johannes Schindelin 2011-10-20 02:45:03 CDT
Presumably this issue is gone, after such a long time without feedback :-)
Comment 4 Johannes Schindelin 2011-10-21 19:05:36 CDT
From private mail:

Date: Fri, 21 Oct 2011 11:48:07 +0200                                           
From: Olivier BARDOT <olivier.bardot@u-clermont1.fr>                            
To: johannes.schindelin@gmx.de                                                  
Subject: Re:[Bug 356] Maximum memory at 860Mb                                   
Parts/Attachments:                                                              
   1 Shown   ~25 lines  Text (charset: ISO-8859-1)                              
   2   OK    ~22 lines  Text (charset: ISO-8859-1)                              ----------------------------------------                                        
                                                                                Hello                                                                           
No, the problem is still there. If I set memory to 1500Mb, after restart of     Fiji, it turns to 1146Mb. I use the no splash method for larger files.          
                                                                                
--                                                                              Amicalement / Sincerely yours                                                   
                                                                                
Olivier BARDOT                                                                  
Comment 5 Johannes Schindelin 2011-10-21 19:06:21 CDT
Olivier, can you test after downloading and overwriting fiji-win32.exe from http://fiji.sc/snaps/fiji-win32.exe please?
Comment 6 Johannes Schindelin 2012-01-05 23:57:23 CST
Spring cleaning! Assuming that absence of complaining means everything is alright now.
Comment 7 olivier bardot 2012-01-23 17:40:00 CST
Fiji 1.46a will not start if jvm.cfg is set to 1072Mb.
I can start with jvm.cfg set to 1572Mb if I use the no-splash .bat as you recommended.
Options>memory shows either 1068 or 1568Mb of maximum memory.
Hope this help.
Comment 8 Johannes Schindelin 2012-02-17 11:06:32 CST
Are you sure that it does not even start? Or does it just not open your images with a message that the memory is full?

If it is the former, could you activate the console output and paste it here? (See http://fiji.sc/Debugging#Command_line_debugging for details.)
Comment 9 olivier bardot 2012-02-20 10:26:59 CST
Created attachment 56
Screen capture freezed Fiji

Screen capture : console window and Fiji when I set the memory to 1100mb.
Comment 10 olivier bardot 2012-02-20 10:33:56 CST
I have try the console mode. I set the memory from 800Mb to 1100Mb by 100Mb step and I get the message "Out of memory". I have attached a screen capture of the whole message.
Comment 11 Johannes Schindelin 2012-02-20 20:00:50 CST
Could you please update and see whether this solves your issue? I fixed a bug I previously thought unrelated, but it might actually be the very same: bug 345.
Comment 12 olivier bardot 2012-02-21 14:16:00 CST
I did the update but this give the same problem and the same message with the console mode. Fiji starts with the jvm.cfg set to -Xmx1070m.
Comment 13 Johannes Schindelin 2012-02-21 19:25:26 CST
Thanks for your persistence. I finally managed to reproduce! And it seems that the memory parsing of jvm.cfg's memory setting did not work. This is now fixed and uploaded!