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Bug 516 - fiji crash on simple neurite tracer
fiji crash on simple neurite tracer
Status: RESOLVED WORKSFORME
Product: Fiji
Classification: Unclassified
Component: Plugins
unspecified
PC Windows
: P4 normal
Assigned To: ImageJ Bugs Mailing List
Depends on:
Blocks:
 
Reported: 2012-10-18 22:28 CDT by making
Modified: 2013-07-07 09:30 CDT
2 users (show)

See Also:
Description making 2012-10-18 22:28:42 CDT 
I have tiff stacks (*.lei) created on a Leica confocal microscope.  Simple Neurite Tracer plugin works on individual images from these stacks, but crashes Fiji if >1 images are in stacks (either original or generated from individual files in Fiji), even if cropped to <1 MB sizes, virtual stacks, or converted to other bit depths.  No error messages, just appcrash.

Information about your version of Java - this information is useful for the Fiji developers:

  os.arch => x86
  os.name => Windows XP
  os.version => 5.1
  java.version => 1.6.0_16
  java.vendor => Sun Microsystems Inc.
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.6.0_16-b01
  java.vm.name => Java HotSpot(TM) Client VM
  java.vm.version => 14.2-b01
  java.vm.vendor => Sun Microsystems Inc.
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.Win32GraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.6
  sun.cpu.endian => little
  sun.desktop => windows
  file.separator => \

The up-to-date check says: REMIND_LATER

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to: C:\PROGRA~1\Fiji.app/java/win32/jdk1.6.0_16/jre/
  ij.dir => C:\PROGRA~1\Fiji.app

Information about the version of each plugin:

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Comment 1 Johannes Schindelin 2012-10-19 00:11:51 CDT 
There must be an error message, but Windows is clever and hides it from you, so you have to work harder as a Windows user to get at it.

The procedure how to trick Windows into stopping to try to be more clever than you is described here: http://fiji.sc/Debugging#Command_line_debugging

Please paste the output here (after enabling Quick Edit in the Properties of the command-line window)!