After updating Fiji this morning (May 7) I can no longer open a number of Fiji plugins.  While trying to open "Rolling_Ball_Background.java", "Diffraction_PSF_3D.java" and "Align_RGB_planes.java" I recieve the error message below.  The only commonality I can find between these files is that they are the only plugins in my Fiji that are .java files and not .jar files.  There appears to be a issue accessing the associated .class files.

Rolling back ImageJ to the previous version (1.47) does not help, it appears to be the Fiji update that has affected these plugins and not ImageJ.

Thanks for the help!

-Doug


Error message:

(Fiji Is Just) ImageJ 1.48v; Java 1.6.0_24 [64-bit]; Windows 7 6.1; 24MB of 3700MB (<1%)
 
java.lang.NoClassDefFoundError: org/scijava/util/LineOutputStream
	at java.lang.ClassLoader.defineClass1(Native Method)
	at java.lang.ClassLoader.defineClassCond(ClassLoader.java:632)
	at java.lang.ClassLoader.defineClass(ClassLoader.java:616)
	at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:141)
	at java.net.URLClassLoader.defineClass(URLClassLoader.java:283)
	at java.net.URLClassLoader.access$000(URLClassLoader.java:58)
	at java.net.URLClassLoader$1.run(URLClassLoader.java:197)
	at java.security.AccessController.doPrivileged(Native Method)
	at java.net.URLClassLoader.findClass(URLClassLoader.java:190)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:248)
	at fiji.scripting.java.PlugInExecutor.tryRun(PlugInExecutor.java:116)
	at fiji.scripting.java.PlugInExecutor.tryRun(PlugInExecutor.java:105)
	at fiji.scripting.java.PlugInExecutor.run(PlugInExecutor.java:86)
	at fiji.scripting.java.Refresh_Javas.runPlugin(Refresh_Javas.java:378)
	at fiji.scripting.java.Refresh_Javas.compileAndRun(Refresh_Javas.java:126)
	at fiji.scripting.java.Refresh_Javas.runScript(Refresh_Javas.java:71)
	at common.RefreshScripts.run(RefreshScripts.java:287)
	at fiji.scripting.java.Refresh_Javas.run(Refresh_Javas.java:61)
	at ij.IJ.runUserPlugIn(IJ.java:199)
	at ij.IJ.runPlugIn(IJ.java:163)
	at ij.Executer.runCommand(Executer.java:131)
	at ij.Executer.run(Executer.java:64)
	at java.lang.Thread.run(Thread.java:662)
Caused by: java.lang.ClassNotFoundException: org.scijava.util.LineOutputStream
	at java.net.URLClassLoader$1.run(URLClassLoader.java:202)
	at java.security.AccessController.doPrivileged(Native Method)
	at java.net.URLClassLoader.findClass(URLClassLoader.java:190)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
	at java.lang.ClassLoader.loadClass(ClassLoader.java:248)
	... 24 more