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Bug 751 - Inconsistent Multiple Imaging Processing results from Macro
Inconsistent Multiple Imaging Processing results from Macro
Status: RESOLVED FIXED
Product: Fiji
Classification: Unclassified
Component: Plugins
unspecified
PC Windows
: P4 normal
Assigned To: ImageJ Bugs Mailing List
Depends on:
Blocks:
 
Reported: 2014-05-21 09:00 CDT by jvcamp01
Modified: 2014-05-22 14:32 CDT
1 user (show)

See Also:
Description jvcamp01 2014-05-21 09:00:53 CDT 
I generated a macro to "Analyze Particles" of a particular "Color Threshold".  If I use Multiple Image Processor on the same file, I get different results.  I can provide the macro if necessary.  I could be my ignorance of the system (and Java, in general).

Information about your version of Java:

  os.arch => x86
  os.name => Windows 7
  os.version => 6.1
  java.version => 1.6.0_24
  java.vendor => Sun Microsystems Inc.
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.6.0_24-b07
  java.vm.name => Java HotSpot(TM) Client VM
  java.vm.version => 19.1-b02
  java.vm.vendor => Sun Microsystems Inc.
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.Win32GraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.6
  sun.cpu.endian => little
  sun.desktop => windows
  file.separator => \

The up-to-date check says: UP_TO_DATE

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to: C:\Users\jvcamp01\Desktop\Fiji.app/java/win32/jdk1.6.0_24//jre
  imagej.dir => C:\Users\jvcamp01\Desktop\Fiji.app

Information about the version of each plugin:

Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20140520124735)
Fiji: http://fiji.sc/update/ (last check:20140520175828)

Files not up-to-date:
  eb8dccd3 (OBSOLETE_UNINSTALLED) 20140225114710 jars/ij-app-2.0.0-beta-7.7.jar
  9f31a952 (OBSOLETE_UNINSTALLED) 20140225114714 jars/ij-commands-2.0.0-beta-7.7.jar
  f7d0e2eb (OBSOLETE) 20140225114634 jars/ij-core-2.0.0-beta-7.7.jar
  736bdcd6 (OBSOLETE) 20130521164954 jars/ij-core-2.0.0-beta4.jar
  24e0bde0 (OBSOLETE_UNINSTALLED) 20140225114708 jars/ij-data-2.0.0-beta-7.7.jar
  00efaa63 (OBSOLETE_UNINSTALLED) 20130925141658 jars/ij-launcher-2.0.2.jar
  56855167 (OBSOLETE_UNINSTALLED) 20140514153441 jars/ij-legacy-2.0.0-SNAPSHOT.jar
  6e95217d (OBSOLETE_UNINSTALLED) 20140225114713 jars/ij-minimaven-2.0.0-beta-7.7.jar
  7600e777 (OBSOLETE_UNINSTALLED) 20140225114710 jars/ij-options-2.0.0-beta-7.7.jar
  7e2766e2 (OBSOLETE_UNINSTALLED) 20140225114713 jars/ij-platforms-2.0.0-beta-7.7.jar
  7a824b7e (OBSOLETE_UNINSTALLED) 20140225114714 jars/ij-scripting-beanshell-2.0.0-beta-7.7.jar
  433f2bc8 (OBSOLETE_UNINSTALLED) 20140225114715 jars/ij-scripting-clojure-2.0.0-beta-7.7.jar
  0a5d89fe (OBSOLETE_UNINSTALLED) 20140225114714 jars/ij-scripting-java-2.0.0-beta-7.7.jar
  de00b500 (OBSOLETE_UNINSTALLED) 20140225114716 jars/ij-scripting-javascript-2.0.0-beta-7.7.jar
  8345a4fd (OBSOLETE_UNINSTALLED) 20140225114715 jars/ij-scripting-jruby-2.0.0-beta-7.7.jar
  598d0fdf (OBSOLETE_UNINSTALLED) 20140225114715 jars/ij-scripting-jython-2.0.0-beta-7.7.jar
  351a73ce (OBSOLETE_UNINSTALLED) 20140225114714 jars/ij-text-2.0.0-beta-7.7.jar
  3cd39ba0 (OBSOLETE_UNINSTALLED) 20140225114705 jars/ij-tools-2.0.0-beta-7.7.jar
  d514e8f0 (OBSOLETE_UNINSTALLED) 20140225114705 jars/ij-ui-2.0.0-beta-7.7.jar
  b6ce787a (OBSOLETE_UNINSTALLED) 20140225114705 jars/ij-ui-common-awt-2.0.0-beta-7.7.jar
  05b1de42 (OBSOLETE_UNINSTALLED) 20140225114713 jars/ij-ui-swing-2.0.0-beta-7.7.jar
  c1ce4424 (OBSOLETE_UNINSTALLED) 20140225114714 jars/ij-ui-swing-commands-2.0.0-beta-7.7.jar
  31d20704 (OBSOLETE_UNINSTALLED) 20140225114713 jars/ij-ui-swing-script-editor-2.0.0-beta-7.7.jar
  d4409c26 (OBSOLETE_UNINSTALLED) 20140225114704 jars/ij-ui-swing-tools-2.0.0-beta-7.7.jar
  59100d0b (OBSOLETE_UNINSTALLED) 20140225114633 jars/ij-ui-swing-updater-2.0.0-beta-7.7.jar
  4bcfadc6 (OBSOLETE_UNINSTALLED) 20140225114633 jars/ij-updater-core-2.0.0-beta-7.7.jar
  61d1660a (OBSOLETE_UNINSTALLED) 20140225114704 jars/ij-updater-ssh-2.0.0-beta-7.7.jar
  6f60a5ac (OBSOLETE_UNINSTALLED) 20140225114714 jars/ij-updater-webdav-2.0.0-beta-7.7.jar
  27161205 (OBSOLETE_UNINSTALLED) 20140225114705 jars/ij-util-awt-2.0.0-beta-7.7.jar
  11b4297f (OBSOLETE_UNINSTALLED) 20140225114710 jars/ij-util-swing-2.0.0-beta-7.7.jar
  eedc0cd9 (OBSOLETE_UNINSTALLED) 20130521164956 jars/serializer-2.7.1.jar
  9ae3dd1b (OBSOLETE_UNINSTALLED) 20140225114710 jars/slf4j-log4j12-1.7.2.jar
  36cdef55 (OBSOLETE_UNINSTALLED) 20130521164958 jars/xalan-2.7.1.jar
  d03176cf (LOCAL_ONLY) 20060502042449 plugins/RGBtoLab_.class
  9e5984f3 (LOCAL_ONLY) 20060502042449 plugins/RGBtoYUV_.class
  e970d65a (MODIFIED) 20100928114853 plugins/Threshold_Colour.jar
  369b6351 (MODIFIED) 20130925141704 plugins/TrackMate_-2.1.1-SNAPSHOT.jar
Comment 1 jvcamp01 2014-05-22 14:32:18 CDT 
This issue was resolved with the latest Java update to the computer, performed soon after this bug was submitted.
-jvcamp01@louisville.edu