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Bug 68 - layer thickness
layer thickness
Status: RESOLVED WONTFIX
Product: Fiji
Classification: Unclassified
Component: TrakEM2
unspecified
PC Windows
: P2 normal
Assigned To: Albert Cardona
Depends on:
Blocks:
 
Reported: 2009-07-21 15:16 CDT by german
Modified: 2011-02-03 04:58 CST
0 users

See Also:
Description german 2009-07-21 15:16:22 CDT 
hi

I have a TrakEM2 project with a layer thickness of 33.031 pixels. I tried to import a stack into this project (right-click on display->import stack). TrakEM then asks for thickness, which I also setted to 33.031. A dialog appears as following:
The current layer thickness is 60.0 which is larger than the desired 33.031 for each stack slice. Adjust current layer's thickness to 33.031?

If I press No, TrakEM creates new layers somewhere between the existing layers, which is wrong, but makes sense, because the thickness is wrong.

If I press Yes, TrakEM creates new Layers with the same Z than the existing ones. For example: i now have two Layers with z=825.775, one with the images, which were already there and one with the freshly imported image.
Comment 1 Albert Cardona 2011-02-03 04:58:52 CST 
This problem is worked around with right-click on the "Top Level [layer set]" node of the "Layer Tree", that has a reset menu item for layer Z and thickness.